RNA–Protein interactions for RNA: ENST00000477308.5

PXK-208, Transcript of PX domain containing serine/threonine kinase like, humanhuman

TSL 1 (best)

Gene PXK, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXK-208ENST00000477308 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
PXK-208ENST00000477308 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
PXK-208ENST00000477308 ABCC9O60706 1549 aa24.41■■□□□ 1.5
PXK-208ENST00000477308 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
PXK-208ENST00000477308 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
PXK-208ENST00000477308 NACADO15069 1562 aa23.58■■□□□ 1.36
PXK-208ENST00000477308 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
PXK-208ENST00000477308 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
PXK-208ENST00000477308 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
PXK-208ENST00000477308 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
PXK-208ENST00000477308 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
PXK-208ENST00000477308 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
PXK-208ENST00000477308 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
PXK-208ENST00000477308 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
PXK-208ENST00000477308 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
PXK-208ENST00000477308 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
PXK-208ENST00000477308 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PXK-208ENST00000477308 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
PXK-208ENST00000477308 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
PXK-208ENST00000477308 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
PXK-208ENST00000477308 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
PXK-208ENST00000477308 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
PXK-208ENST00000477308 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
PXK-208ENST00000477308 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
PXK-208ENST00000477308 NCAPD3P42695 1498 aa21.76■■□□□ 1.07
PXK-208ENST00000477308 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
PXK-208ENST00000477308 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
PXK-208ENST00000477308 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
PXK-208ENST00000477308 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
PXK-208ENST00000477308 WIZO95785 1651 aa21.63■■□□□ 1.05
PXK-208ENST00000477308 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
PXK-208ENST00000477308 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
PXK-208ENST00000477308 NESP48681 1621 aa21.17■□□□□ 0.98
PXK-208ENST00000477308 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
PXK-208ENST00000477308 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
PXK-208ENST00000477308 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.97
PXK-208ENST00000477308 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
PXK-208ENST00000477308 CFTRP13569 1480 aa21.04■□□□□ 0.96
PXK-208ENST00000477308 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
PXK-208ENST00000477308 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
PXK-208ENST00000477308 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
PXK-208ENST00000477308 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
PXK-208ENST00000477308 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
PXK-208ENST00000477308 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
PXK-208ENST00000477308 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
PXK-208ENST00000477308 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
PXK-208ENST00000477308 CUX2O14529 1486 aa20.77■□□□□ 0.92
PXK-208ENST00000477308 WDR62O43379 1518 aa20.7■□□□□ 0.9
PXK-208ENST00000477308 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
PXK-208ENST00000477308 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
PXK-208ENST00000477308 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
PXK-208ENST00000477308 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
PXK-208ENST00000477308 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
PXK-208ENST00000477308 CUX1P39880 1505 aa20.47■□□□□ 0.87
PXK-208ENST00000477308 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
PXK-208ENST00000477308 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
PXK-208ENST00000477308 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
PXK-208ENST00000477308 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
PXK-208ENST00000477308 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
PXK-208ENST00000477308 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
PXK-208ENST00000477308 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
PXK-208ENST00000477308 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.85
PXK-208ENST00000477308 SOGA1O94964 1423 aa20.32■□□□□ 0.84
PXK-208ENST00000477308 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
PXK-208ENST00000477308 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
PXK-208ENST00000477308 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
PXK-208ENST00000477308 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
PXK-208ENST00000477308 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
PXK-208ENST00000477308 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
PXK-208ENST00000477308 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
PXK-208ENST00000477308 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
PXK-208ENST00000477308 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
PXK-208ENST00000477308 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
PXK-208ENST00000477308 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
PXK-208ENST00000477308 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
PXK-208ENST00000477308 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
PXK-208ENST00000477308 RUSC2Q8N2Y8 1516 aa20.03■□□□□ 0.8
PXK-208ENST00000477308 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
PXK-208ENST00000477308 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
PXK-208ENST00000477308 EEA1Q15075 1411 aa19.97■□□□□ 0.79
PXK-208ENST00000477308 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
PXK-208ENST00000477308 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
PXK-208ENST00000477308 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
PXK-208ENST00000477308 CHD1O14646 1710 aa19.93■□□□□ 0.78
PXK-208ENST00000477308 FBLN2P98095 1184 aa19.93■□□□□ 0.78
PXK-208ENST00000477308 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
PXK-208ENST00000477308 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
PXK-208ENST00000477308 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
PXK-208ENST00000477308 IGF1RP08069 1367 aa19.89■□□□□ 0.77
PXK-208ENST00000477308 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PXK-208ENST00000477308 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
PXK-208ENST00000477308 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
PXK-208ENST00000477308 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
PXK-208ENST00000477308 CUL7Q14999 1698 aa19.8■□□□□ 0.76
PXK-208ENST00000477308 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
PXK-208ENST00000477308 PRXQ9BXM0 1461 aa19.76■□□□□ 0.75
PXK-208ENST00000477308 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
PXK-208ENST00000477308 KIF21BO75037 1637 aa19.72■□□□□ 0.75
PXK-208ENST00000477308 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
PXK-208ENST00000477308 NUP160Q12769 1436 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms