RNA–Protein interactions for RNA: ENST00000476968.5

TMEM39B-207, Transcript of transmembrane protein 39B, humanhuman

TSL 5

Gene TMEM39B, Length 1,994 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-207ENST00000476968 NISCHQ9Y2I1 1504 aa44.76■■■■■ 4.76
TMEM39B-207ENST00000476968 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.83
TMEM39B-207ENST00000476968 ZCCHC6Q5VYS8 1495 aaKnown RBP37.54■■■■□ 3.6
TMEM39B-207ENST00000476968 ABCC9O60706 1549 aa37.37■■■■□ 3.57
TMEM39B-207ENST00000476968 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
TMEM39B-207ENST00000476968 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
TMEM39B-207ENST00000476968 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
TMEM39B-207ENST00000476968 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
TMEM39B-207ENST00000476968 NACADO15069 1562 aa36.4■■■■□ 3.42
TMEM39B-207ENST00000476968 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
TMEM39B-207ENST00000476968 SCRIBQ14160 1630 aa36.07■■■■□ 3.36
TMEM39B-207ENST00000476968 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
TMEM39B-207ENST00000476968 PABPN1Q86U42 306 aaKnown RBP eCLIP35.27■■■■□ 3.24
TMEM39B-207ENST00000476968 BICRAQ9NZM4 1560 aa35.24■■■■□ 3.23
TMEM39B-207ENST00000476968 SUPT5HO00267 1087 aaKnown RBP35.05■■■■□ 3.2
TMEM39B-207ENST00000476968 CECR2Q9BXF3 1484 aa34.95■■■■□ 3.19
TMEM39B-207ENST00000476968 RSF1Q96T23 1441 aaPredicted RBP34.69■■■■□ 3.14
TMEM39B-207ENST00000476968 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
TMEM39B-207ENST00000476968 BAZ1AQ9NRL2 1556 aaPredicted RBP34.52■■■■□ 3.12
TMEM39B-207ENST00000476968 SMARCA4P51532 1647 aa34.46■■■■□ 3.11
TMEM39B-207ENST00000476968 WIZO95785 1651 aa34.39■■■■□ 3.1
TMEM39B-207ENST00000476968 EIF4G1Q04637 1599 aaKnown RBP34.16■■■■□ 3.06
TMEM39B-207ENST00000476968 ATAD2BQ9ULI0 1458 aa33.97■■■■□ 3.03
TMEM39B-207ENST00000476968 PEG3Q9GZU2 1588 aa33.97■■■■□ 3.03
TMEM39B-207ENST00000476968 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
TMEM39B-207ENST00000476968 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
TMEM39B-207ENST00000476968 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
TMEM39B-207ENST00000476968 BAZ1BQ9UIG0 1483 aaKnown RBP33.74■■■□□ 2.99
TMEM39B-207ENST00000476968 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
TMEM39B-207ENST00000476968 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
TMEM39B-207ENST00000476968 HMGXB3Q12766 1538 aa33.55■■■□□ 2.96
TMEM39B-207ENST00000476968 CHIC1Q5VXU3 224 aa33.34■■■□□ 2.93
TMEM39B-207ENST00000476968 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
TMEM39B-207ENST00000476968 ABCC8Q09428 1581 aa32.94■■■□□ 2.86
TMEM39B-207ENST00000476968 CFTRP13569 1480 aa32.88■■■□□ 2.85
TMEM39B-207ENST00000476968 TRIM41Q8WV44 630 aa32.84■■■□□ 2.85
TMEM39B-207ENST00000476968 CADPSQ9ULU8 1353 aa32.81■■■□□ 2.84
TMEM39B-207ENST00000476968 NESP48681 1621 aa32.78■■■□□ 2.84
TMEM39B-207ENST00000476968 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
TMEM39B-207ENST00000476968 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
TMEM39B-207ENST00000476968 SYNJ1O43426 1573 aa32.57■■■□□ 2.8
TMEM39B-207ENST00000476968 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
TMEM39B-207ENST00000476968 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
TMEM39B-207ENST00000476968 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
TMEM39B-207ENST00000476968 CUX1P39880 1505 aa32.41■■■□□ 2.78
TMEM39B-207ENST00000476968 TOP2BQ02880 1626 aa32.35■■■□□ 2.77
TMEM39B-207ENST00000476968 BIVM-ERCC5R4GMW8 1640 aa32.3■■■□□ 2.76
TMEM39B-207ENST00000476968 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
TMEM39B-207ENST00000476968 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
TMEM39B-207ENST00000476968 CEP164Q9UPV0 1460 aa32.27■■■□□ 2.76
TMEM39B-207ENST00000476968 SOGA1O94964 1423 aa32.26■■■□□ 2.75
TMEM39B-207ENST00000476968 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
TMEM39B-207ENST00000476968 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.75
TMEM39B-207ENST00000476968 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
TMEM39B-207ENST00000476968 TOPBP1Q92547 1522 aa32.11■■■□□ 2.73
TMEM39B-207ENST00000476968 EHMT2Q96KQ7 1210 aa32.1■■■□□ 2.73
TMEM39B-207ENST00000476968 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
TMEM39B-207ENST00000476968 FGD5Q6ZNL6 1462 aa32.08■■■□□ 2.73
TMEM39B-207ENST00000476968 ERCC6Q03468 1493 aa31.96■■■□□ 2.71
TMEM39B-207ENST00000476968 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
TMEM39B-207ENST00000476968 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
TMEM39B-207ENST00000476968 MRC2Q9UBG0 1479 aa31.92■■■□□ 2.7
TMEM39B-207ENST00000476968 CSRNP3Q8WYN3 585 aa31.88■■■□□ 2.69
TMEM39B-207ENST00000476968 EEA1Q15075 1411 aa31.85■■■□□ 2.69
TMEM39B-207ENST00000476968 CUX2O14529 1486 aa31.82■■■□□ 2.68
TMEM39B-207ENST00000476968 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
TMEM39B-207ENST00000476968 WDR62O43379 1518 aa31.76■■■□□ 2.68
TMEM39B-207ENST00000476968 KIF27Q86VH2 1401 aa31.76■■■□□ 2.67
TMEM39B-207ENST00000476968 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
TMEM39B-207ENST00000476968 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
TMEM39B-207ENST00000476968 TARBP1Q13395 1621 aaKnown RBP31.65■■■□□ 2.66
TMEM39B-207ENST00000476968 TDRD9Q8NDG6 1382 aaKnown RBP31.64■■■□□ 2.66
TMEM39B-207ENST00000476968 IGF1RP08069 1367 aa31.6■■■□□ 2.65
TMEM39B-207ENST00000476968 RAPGEF2Q9Y4G8 1499 aa31.58■■■□□ 2.65
TMEM39B-207ENST00000476968 KIF21BO75037 1637 aa31.55■■■□□ 2.64
TMEM39B-207ENST00000476968 PRXQ9BXM0 1461 aa31.53■■■□□ 2.64
TMEM39B-207ENST00000476968 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
TMEM39B-207ENST00000476968 UBTFP17480 764 aaKnown RBP31.5■■■□□ 2.63
TMEM39B-207ENST00000476968 ABCA5Q8WWZ7 1642 aa31.5■■■□□ 2.63
TMEM39B-207ENST00000476968 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
TMEM39B-207ENST00000476968 AQRO60306 1485 aaKnown RBP eCLIP31.47■■■□□ 2.633e-6■■■□□ 17
TMEM39B-207ENST00000476968 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
TMEM39B-207ENST00000476968 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
TMEM39B-207ENST00000476968 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
TMEM39B-207ENST00000476968 TNIKQ9UKE5 1360 aa31.37■■■□□ 2.61
TMEM39B-207ENST00000476968 ERICH3Q5RHP9 1530 aa31.36■■■□□ 2.61
TMEM39B-207ENST00000476968 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
TMEM39B-207ENST00000476968 EIF4G3O43432 1585 aaKnown RBP31.29■■■□□ 2.6
TMEM39B-207ENST00000476968 CEP162Q5TB80 1403 aa31.27■■■□□ 2.6
TMEM39B-207ENST00000476968 RANGAP1P46060 587 aaPredicted RBP31.26■■■□□ 2.6
TMEM39B-207ENST00000476968 CUL7Q14999 1698 aa31.23■■■□□ 2.59
TMEM39B-207ENST00000476968 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
TMEM39B-207ENST00000476968 SNAPC4Q5SXM2 1469 aa31.12■■■□□ 2.57
TMEM39B-207ENST00000476968 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
TMEM39B-207ENST00000476968 FHAD1B1AJZ9 1412 aa31.06■■■□□ 2.56
TMEM39B-207ENST00000476968 CLIP1P30622 1438 aa31.06■■■□□ 2.56
TMEM39B-207ENST00000476968 MAGI1Q96QZ7 1491 aaPredicted RBP30.93■■■□□ 2.54
TMEM39B-207ENST00000476968 CTTNBP2Q8WZ74 1663 aa30.91■■■□□ 2.54
TMEM39B-207ENST00000476968 FBLN2P98095 1184 aa30.9■■■□□ 2.54
TMEM39B-207ENST00000476968 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 312.6 ms