RNA–Protein interactions for RNA: ENST00000476948.1

PWP2-204, Transcript of PWP2, small subunit processome component, humanhuman

TSL 3

Gene PWP2, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PWP2-204ENST00000476948 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
PWP2-204ENST00000476948 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
PWP2-204ENST00000476948 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
PWP2-204ENST00000476948 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
PWP2-204ENST00000476948 ABCC9O60706 1549 aa28.08■■■□□ 2.09
PWP2-204ENST00000476948 PHF23Q9BUL5 403 aaPredicted RBP27.68■■■□□ 2.02
PWP2-204ENST00000476948 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
PWP2-204ENST00000476948 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
PWP2-204ENST00000476948 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
PWP2-204ENST00000476948 NACADO15069 1562 aa27.17■■□□□ 1.94
PWP2-204ENST00000476948 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
PWP2-204ENST00000476948 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
PWP2-204ENST00000476948 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
PWP2-204ENST00000476948 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
PWP2-204ENST00000476948 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
PWP2-204ENST00000476948 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
PWP2-204ENST00000476948 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
PWP2-204ENST00000476948 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PWP2-204ENST00000476948 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
PWP2-204ENST00000476948 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
PWP2-204ENST00000476948 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PWP2-204ENST00000476948 FOXD1Q16676 465 aa25.48■■□□□ 1.67
PWP2-204ENST00000476948 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
PWP2-204ENST00000476948 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
PWP2-204ENST00000476948 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
PWP2-204ENST00000476948 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
PWP2-204ENST00000476948 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
PWP2-204ENST00000476948 WIZO95785 1651 aa25.25■■□□□ 1.63
PWP2-204ENST00000476948 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
PWP2-204ENST00000476948 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
PWP2-204ENST00000476948 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
PWP2-204ENST00000476948 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
PWP2-204ENST00000476948 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
PWP2-204ENST00000476948 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
PWP2-204ENST00000476948 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
PWP2-204ENST00000476948 TOP2AP11388 1531 aaKnown RBP24.92■■□□□ 1.58
PWP2-204ENST00000476948 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
PWP2-204ENST00000476948 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
PWP2-204ENST00000476948 NESP48681 1621 aa24.5■■□□□ 1.51
PWP2-204ENST00000476948 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
PWP2-204ENST00000476948 ADRA2BP18089 450 aa24.39■■□□□ 1.49
PWP2-204ENST00000476948 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
PWP2-204ENST00000476948 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
PWP2-204ENST00000476948 CFTRP13569 1480 aa24.32■■□□□ 1.48
PWP2-204ENST00000476948 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
PWP2-204ENST00000476948 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
PWP2-204ENST00000476948 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
PWP2-204ENST00000476948 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
PWP2-204ENST00000476948 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
PWP2-204ENST00000476948 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
PWP2-204ENST00000476948 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
PWP2-204ENST00000476948 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
PWP2-204ENST00000476948 PIAS4Q8N2W9 510 aaPredicted RBP23.95■■□□□ 1.42
PWP2-204ENST00000476948 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
PWP2-204ENST00000476948 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
PWP2-204ENST00000476948 WDR62O43379 1518 aa23.89■■□□□ 1.41
PWP2-204ENST00000476948 CUX1P39880 1505 aa23.86■■□□□ 1.41
PWP2-204ENST00000476948 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
PWP2-204ENST00000476948 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.41
PWP2-204ENST00000476948 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
PWP2-204ENST00000476948 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
PWP2-204ENST00000476948 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
PWP2-204ENST00000476948 TOP2BQ02880 1626 aa23.72■■□□□ 1.39
PWP2-204ENST00000476948 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
PWP2-204ENST00000476948 CUX2O14529 1486 aa23.65■■□□□ 1.38
PWP2-204ENST00000476948 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
PWP2-204ENST00000476948 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
PWP2-204ENST00000476948 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
PWP2-204ENST00000476948 RAD54L2Q9Y4B4 1467 aa23.57■■□□□ 1.36
PWP2-204ENST00000476948 MSH5O43196 834 aa23.51■■□□□ 1.35
PWP2-204ENST00000476948 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
PWP2-204ENST00000476948 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
PWP2-204ENST00000476948 SOGA1O94964 1423 aa23.44■■□□□ 1.34
PWP2-204ENST00000476948 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
PWP2-204ENST00000476948 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
PWP2-204ENST00000476948 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
PWP2-204ENST00000476948 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
PWP2-204ENST00000476948 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
PWP2-204ENST00000476948 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.32
PWP2-204ENST00000476948 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
PWP2-204ENST00000476948 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
PWP2-204ENST00000476948 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
PWP2-204ENST00000476948 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
PWP2-204ENST00000476948 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
PWP2-204ENST00000476948 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
PWP2-204ENST00000476948 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
PWP2-204ENST00000476948 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
PWP2-204ENST00000476948 CHD1O14646 1710 aa23.11■■□□□ 1.29
PWP2-204ENST00000476948 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
PWP2-204ENST00000476948 CUL7Q14999 1698 aa23.04■■□□□ 1.28
PWP2-204ENST00000476948 IGF1RP08069 1367 aa23.02■■□□□ 1.28
PWP2-204ENST00000476948 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
PWP2-204ENST00000476948 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
PWP2-204ENST00000476948 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
PWP2-204ENST00000476948 EEA1Q15075 1411 aa22.94■■□□□ 1.26
PWP2-204ENST00000476948 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
PWP2-204ENST00000476948 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
PWP2-204ENST00000476948 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
PWP2-204ENST00000476948 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
PWP2-204ENST00000476948 KIF21BO75037 1637 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms