RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
RPN1-202ENST00000476931 CCDC180Q9P1Z9 1646 aa35.63■■■■□ 3.29
RPN1-202ENST00000476931 ABCC9O60706 1549 aa34.6■■■■□ 3.13
RPN1-202ENST00000476931 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
RPN1-202ENST00000476931 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
RPN1-202ENST00000476931 NACADO15069 1562 aa33.54■■■□□ 2.96
RPN1-202ENST00000476931 MYO15BQ96JP2 1530 aa33.49■■■□□ 2.95
RPN1-202ENST00000476931 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
RPN1-202ENST00000476931 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
RPN1-202ENST00000476931 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
RPN1-202ENST00000476931 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
RPN1-202ENST00000476931 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
RPN1-202ENST00000476931 BICRAQ9NZM4 1560 aa32.35■■■□□ 2.77
RPN1-202ENST00000476931 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
RPN1-202ENST00000476931 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
RPN1-202ENST00000476931 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
RPN1-202ENST00000476931 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
RPN1-202ENST00000476931 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
RPN1-202ENST00000476931 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
RPN1-202ENST00000476931 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
RPN1-202ENST00000476931 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
RPN1-202ENST00000476931 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
RPN1-202ENST00000476931 ATAD2BQ9ULI0 1458 aa30.99■■■□□ 2.55
RPN1-202ENST00000476931 SMARCA2P51531 1590 aa30.97■■■□□ 2.55
RPN1-202ENST00000476931 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
RPN1-202ENST00000476931 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
RPN1-202ENST00000476931 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
RPN1-202ENST00000476931 BAZ1BQ9UIG0 1483 aaKnown RBP30.74■■■□□ 2.51
RPN1-202ENST00000476931 WIZO95785 1651 aa30.63■■■□□ 2.49
RPN1-202ENST00000476931 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
RPN1-202ENST00000476931 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
RPN1-202ENST00000476931 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
RPN1-202ENST00000476931 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
RPN1-202ENST00000476931 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
RPN1-202ENST00000476931 NESP48681 1621 aa29.99■■■□□ 2.39
RPN1-202ENST00000476931 CFTRP13569 1480 aa29.95■■■□□ 2.39
RPN1-202ENST00000476931 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
RPN1-202ENST00000476931 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
RPN1-202ENST00000476931 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
RPN1-202ENST00000476931 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
RPN1-202ENST00000476931 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
RPN1-202ENST00000476931 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
RPN1-202ENST00000476931 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
RPN1-202ENST00000476931 CUX2O14529 1486 aa29.48■■■□□ 2.31
RPN1-202ENST00000476931 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
RPN1-202ENST00000476931 ABCC8Q09428 1581 aa29.39■■■□□ 2.29
RPN1-202ENST00000476931 WDR62O43379 1518 aa29.37■■■□□ 2.29
RPN1-202ENST00000476931 URB2Q14146 1524 aaKnown RBP29.32■■■□□ 2.28
RPN1-202ENST00000476931 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
RPN1-202ENST00000476931 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.26
RPN1-202ENST00000476931 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
RPN1-202ENST00000476931 CUX1P39880 1505 aa29.07■■■□□ 2.24
RPN1-202ENST00000476931 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
RPN1-202ENST00000476931 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
RPN1-202ENST00000476931 SOGA1O94964 1423 aa28.97■■■□□ 2.23
RPN1-202ENST00000476931 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.22
RPN1-202ENST00000476931 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
RPN1-202ENST00000476931 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
RPN1-202ENST00000476931 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
RPN1-202ENST00000476931 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
RPN1-202ENST00000476931 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
RPN1-202ENST00000476931 ZNF608Q9ULD9 1512 aaPredicted RBP28.77■■■□□ 2.2
RPN1-202ENST00000476931 ABCA10Q8WWZ4 1543 aa28.74■■■□□ 2.19
RPN1-202ENST00000476931 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
RPN1-202ENST00000476931 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
RPN1-202ENST00000476931 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
RPN1-202ENST00000476931 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.197e-7■■■□□ 17.9
RPN1-202ENST00000476931 EIF4G3O43432 1585 aaKnown RBP28.61■■■□□ 2.17
RPN1-202ENST00000476931 GAPVD1Q14C86 1478 aa28.6■■■□□ 2.17
RPN1-202ENST00000476931 GRIN2BQ13224 1484 aa28.57■■■□□ 2.16
RPN1-202ENST00000476931 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
RPN1-202ENST00000476931 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
RPN1-202ENST00000476931 ABCA5Q8WWZ7 1642 aa28.49■■■□□ 2.15
RPN1-202ENST00000476931 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
RPN1-202ENST00000476931 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
RPN1-202ENST00000476931 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
RPN1-202ENST00000476931 ERICH3Q5RHP9 1530 aa28.41■■■□□ 2.14
RPN1-202ENST00000476931 SNAPC4Q5SXM2 1469 aa28.4■■■□□ 2.14
RPN1-202ENST00000476931 FBLN2P98095 1184 aa28.38■■■□□ 2.13
RPN1-202ENST00000476931 IGF1RP08069 1367 aa28.37■■■□□ 2.13
RPN1-202ENST00000476931 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
RPN1-202ENST00000476931 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
RPN1-202ENST00000476931 FHAD1B1AJZ9 1412 aa28.32■■■□□ 2.12
RPN1-202ENST00000476931 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
RPN1-202ENST00000476931 EEA1Q15075 1411 aa28.2■■■□□ 2.11
RPN1-202ENST00000476931 CARMIL1Q5VZK9 1371 aa28.2■■■□□ 2.1
RPN1-202ENST00000476931 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
RPN1-202ENST00000476931 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
RPN1-202ENST00000476931 GRIN2AQ12879 1464 aa28.16■■■□□ 2.1
RPN1-202ENST00000476931 CSRNP3Q8WYN3 585 aa28.15■■■□□ 2.1
RPN1-202ENST00000476931 CHD1O14646 1710 aa28.15■■■□□ 2.1
RPN1-202ENST00000476931 CUL7Q14999 1698 aa28.14■■■□□ 2.1
RPN1-202ENST00000476931 NUP160Q12769 1436 aa28.05■■■□□ 2.08
RPN1-202ENST00000476931 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
RPN1-202ENST00000476931 PRXQ9BXM0 1461 aa27.98■■■□□ 2.07
RPN1-202ENST00000476931 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
RPN1-202ENST00000476931 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
RPN1-202ENST00000476931 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
RPN1-202ENST00000476931 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
RPN1-202ENST00000476931 JPH4Q96JJ6 628 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms