RNA–Protein interactions for RNA: ENST00000476619.5

RTCB-203, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-203ENST00000476619 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0.01
RTCB-203ENST00000476619 ABCC9O60706 1549 aa13.58□□□□□ -0.24
RTCB-203ENST00000476619 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
RTCB-203ENST00000476619 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
RTCB-203ENST00000476619 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
RTCB-203ENST00000476619 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
RTCB-203ENST00000476619 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
RTCB-203ENST00000476619 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
RTCB-203ENST00000476619 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
RTCB-203ENST00000476619 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
RTCB-203ENST00000476619 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
RTCB-203ENST00000476619 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
RTCB-203ENST00000476619 NACADO15069 1562 aa12.42□□□□□ -0.42
RTCB-203ENST00000476619 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.43
RTCB-203ENST00000476619 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
RTCB-203ENST00000476619 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
RTCB-203ENST00000476619 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
RTCB-203ENST00000476619 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
RTCB-203ENST00000476619 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
RTCB-203ENST00000476619 EIF4G1Q04637 1599 aaKnown RBP12.06□□□□□ -0.48
RTCB-203ENST00000476619 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
RTCB-203ENST00000476619 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
RTCB-203ENST00000476619 CUX2O14529 1486 aa11.93□□□□□ -0.5
RTCB-203ENST00000476619 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
RTCB-203ENST00000476619 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
RTCB-203ENST00000476619 RSF1Q96T23 1441 aaPredicted RBP11.65□□□□□ -0.54
RTCB-203ENST00000476619 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
RTCB-203ENST00000476619 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
RTCB-203ENST00000476619 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
RTCB-203ENST00000476619 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
RTCB-203ENST00000476619 PHF23Q9BUL5 403 aaPredicted RBP11.57□□□□□ -0.56
RTCB-203ENST00000476619 NESP48681 1621 aa11.52□□□□□ -0.57
RTCB-203ENST00000476619 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
RTCB-203ENST00000476619 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
RTCB-203ENST00000476619 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
RTCB-203ENST00000476619 WIZO95785 1651 aa11.47□□□□□ -0.57
RTCB-203ENST00000476619 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
RTCB-203ENST00000476619 SMARCA2P51531 1590 aa11.42□□□□□ -0.58
RTCB-203ENST00000476619 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
RTCB-203ENST00000476619 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
RTCB-203ENST00000476619 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
RTCB-203ENST00000476619 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
RTCB-203ENST00000476619 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
RTCB-203ENST00000476619 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
RTCB-203ENST00000476619 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
RTCB-203ENST00000476619 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
RTCB-203ENST00000476619 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
RTCB-203ENST00000476619 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
RTCB-203ENST00000476619 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
RTCB-203ENST00000476619 WDR62O43379 1518 aa11.2□□□□□ -0.62
RTCB-203ENST00000476619 SENP3Q9H4L4 574 aaPredicted RBP11.2□□□□□ -0.62
RTCB-203ENST00000476619 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
RTCB-203ENST00000476619 ARHGEF11O15085 1522 aa11.12□□□□□ -0.63
RTCB-203ENST00000476619 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
RTCB-203ENST00000476619 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
RTCB-203ENST00000476619 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
RTCB-203ENST00000476619 CFTRP13569 1480 aa11.08□□□□□ -0.64
RTCB-203ENST00000476619 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
RTCB-203ENST00000476619 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
RTCB-203ENST00000476619 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
RTCB-203ENST00000476619 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
RTCB-203ENST00000476619 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
RTCB-203ENST00000476619 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
RTCB-203ENST00000476619 LMTK3Q96Q04 1460 aa10.94□□□□□ -0.66
RTCB-203ENST00000476619 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
RTCB-203ENST00000476619 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
RTCB-203ENST00000476619 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
RTCB-203ENST00000476619 SOCS7O14512 581 aa10.92□□□□□ -0.66
RTCB-203ENST00000476619 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
RTCB-203ENST00000476619 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
RTCB-203ENST00000476619 EEA1Q15075 1411 aa10.85□□□□□ -0.67
RTCB-203ENST00000476619 CUX1P39880 1505 aa10.85□□□□□ -0.67
RTCB-203ENST00000476619 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
RTCB-203ENST00000476619 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
RTCB-203ENST00000476619 CHD1O14646 1710 aa10.81□□□□□ -0.68
RTCB-203ENST00000476619 DNMBPQ6XZF7 1577 aa10.81□□□□□ -0.68
RTCB-203ENST00000476619 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.68
RTCB-203ENST00000476619 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
RTCB-203ENST00000476619 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
RTCB-203ENST00000476619 FBXO41Q8TF61 875 aa10.74□□□□□ -0.69
RTCB-203ENST00000476619 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
RTCB-203ENST00000476619 FBLN2P98095 1184 aa10.73□□□□□ -0.69
RTCB-203ENST00000476619 SOGA1O94964 1423 aa10.73□□□□□ -0.69
RTCB-203ENST00000476619 KIF21BO75037 1637 aa10.71□□□□□ -0.69
RTCB-203ENST00000476619 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
RTCB-203ENST00000476619 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
RTCB-203ENST00000476619 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
RTCB-203ENST00000476619 ABCA10Q8WWZ4 1543 aa10.69□□□□□ -0.7
RTCB-203ENST00000476619 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
RTCB-203ENST00000476619 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
RTCB-203ENST00000476619 TARBP1Q13395 1621 aaKnown RBP10.67□□□□□ -0.7
RTCB-203ENST00000476619 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
RTCB-203ENST00000476619 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
RTCB-203ENST00000476619 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
RTCB-203ENST00000476619 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
RTCB-203ENST00000476619 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
RTCB-203ENST00000476619 ERCC6L2Q5T890 1561 aa10.64□□□□□ -0.71
RTCB-203ENST00000476619 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
RTCB-203ENST00000476619 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
RTCB-203ENST00000476619 GAPVD1Q14C86 1478 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms