RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
XPC-205ENST00000476581 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
XPC-205ENST00000476581 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
XPC-205ENST00000476581 ABCC9O60706 1549 aa22.87■■□□□ 1.25
XPC-205ENST00000476581 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
XPC-205ENST00000476581 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
XPC-205ENST00000476581 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
XPC-205ENST00000476581 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
XPC-205ENST00000476581 NACADO15069 1562 aa22.18■■□□□ 1.14
XPC-205ENST00000476581 SCRIBQ14160 1630 aa22.08■■□□□ 1.12
XPC-205ENST00000476581 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
XPC-205ENST00000476581 UNC13AQ9UPW8 1703 aa21.82■■□□□ 1.08
XPC-205ENST00000476581 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
XPC-205ENST00000476581 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
XPC-205ENST00000476581 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
XPC-205ENST00000476581 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
XPC-205ENST00000476581 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
XPC-205ENST00000476581 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
XPC-205ENST00000476581 WIZO95785 1651 aa21.06■□□□□ 0.96
XPC-205ENST00000476581 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
XPC-205ENST00000476581 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
XPC-205ENST00000476581 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
XPC-205ENST00000476581 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
XPC-205ENST00000476581 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
XPC-205ENST00000476581 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
XPC-205ENST00000476581 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
XPC-205ENST00000476581 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
XPC-205ENST00000476581 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
XPC-205ENST00000476581 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
XPC-205ENST00000476581 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
XPC-205ENST00000476581 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
XPC-205ENST00000476581 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
XPC-205ENST00000476581 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
XPC-205ENST00000476581 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
XPC-205ENST00000476581 NESP48681 1621 aa20.08■□□□□ 0.81
XPC-205ENST00000476581 CFTRP13569 1480 aa20.06■□□□□ 0.8
XPC-205ENST00000476581 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
XPC-205ENST00000476581 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
XPC-205ENST00000476581 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
XPC-205ENST00000476581 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
XPC-205ENST00000476581 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.781e-6■■■■■ 58.5
XPC-205ENST00000476581 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
XPC-205ENST00000476581 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.77
XPC-205ENST00000476581 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
XPC-205ENST00000476581 CUX1P39880 1505 aa19.82■□□□□ 0.76
XPC-205ENST00000476581 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
XPC-205ENST00000476581 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
XPC-205ENST00000476581 SOGA1O94964 1423 aa19.75■□□□□ 0.75
XPC-205ENST00000476581 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
XPC-205ENST00000476581 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
XPC-205ENST00000476581 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
XPC-205ENST00000476581 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
XPC-205ENST00000476581 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
XPC-205ENST00000476581 HRCP23327 699 aa19.67■□□□□ 0.74
XPC-205ENST00000476581 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
XPC-205ENST00000476581 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
XPC-205ENST00000476581 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
XPC-205ENST00000476581 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
XPC-205ENST00000476581 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
XPC-205ENST00000476581 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
XPC-205ENST00000476581 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
XPC-205ENST00000476581 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
XPC-205ENST00000476581 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
XPC-205ENST00000476581 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
XPC-205ENST00000476581 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
XPC-205ENST00000476581 CUX2O14529 1486 aa19.44■□□□□ 0.7
XPC-205ENST00000476581 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
XPC-205ENST00000476581 WDR62O43379 1518 aa19.4■□□□□ 0.7
XPC-205ENST00000476581 EEA1Q15075 1411 aa19.37■□□□□ 0.69
XPC-205ENST00000476581 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
XPC-205ENST00000476581 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
XPC-205ENST00000476581 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
XPC-205ENST00000476581 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
XPC-205ENST00000476581 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
XPC-205ENST00000476581 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
XPC-205ENST00000476581 IGF1RP08069 1367 aa19.3■□□□□ 0.68
XPC-205ENST00000476581 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
XPC-205ENST00000476581 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.677e-8■■■■■ 40.1
XPC-205ENST00000476581 KIF21BO75037 1637 aa19.25■□□□□ 0.67
XPC-205ENST00000476581 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
XPC-205ENST00000476581 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
XPC-205ENST00000476581 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
XPC-205ENST00000476581 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
XPC-205ENST00000476581 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
XPC-205ENST00000476581 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
XPC-205ENST00000476581 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
XPC-205ENST00000476581 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
XPC-205ENST00000476581 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
XPC-205ENST00000476581 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
XPC-205ENST00000476581 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
XPC-205ENST00000476581 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
XPC-205ENST00000476581 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
XPC-205ENST00000476581 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
XPC-205ENST00000476581 CUL7Q14999 1698 aa19.05■□□□□ 0.64
XPC-205ENST00000476581 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
XPC-205ENST00000476581 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
XPC-205ENST00000476581 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
XPC-205ENST00000476581 ADAMTS12P58397 1594 aa19■□□□□ 0.63
XPC-205ENST00000476581 CLIP1P30622 1438 aa18.95■□□□□ 0.62
XPC-205ENST00000476581 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms