RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
CDKAL1-203ENST00000476517 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
CDKAL1-203ENST00000476517 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
CDKAL1-203ENST00000476517 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
CDKAL1-203ENST00000476517 ABCC9O60706 1549 aa24.45■■□□□ 1.51
CDKAL1-203ENST00000476517 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
CDKAL1-203ENST00000476517 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
CDKAL1-203ENST00000476517 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
CDKAL1-203ENST00000476517 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
CDKAL1-203ENST00000476517 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
CDKAL1-203ENST00000476517 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
CDKAL1-203ENST00000476517 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
CDKAL1-203ENST00000476517 NACADO15069 1562 aa23.04■■□□□ 1.28
CDKAL1-203ENST00000476517 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
CDKAL1-203ENST00000476517 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
CDKAL1-203ENST00000476517 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
CDKAL1-203ENST00000476517 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
CDKAL1-203ENST00000476517 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
CDKAL1-203ENST00000476517 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
CDKAL1-203ENST00000476517 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CDKAL1-203ENST00000476517 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
CDKAL1-203ENST00000476517 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
CDKAL1-203ENST00000476517 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
CDKAL1-203ENST00000476517 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
CDKAL1-203ENST00000476517 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
CDKAL1-203ENST00000476517 FOXD1Q16676 465 aa21.82■■□□□ 1.08
CDKAL1-203ENST00000476517 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
CDKAL1-203ENST00000476517 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
CDKAL1-203ENST00000476517 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
CDKAL1-203ENST00000476517 WIZO95785 1651 aa21.66■■□□□ 1.06
CDKAL1-203ENST00000476517 CUX2O14529 1486 aa21.55■■□□□ 1.04
CDKAL1-203ENST00000476517 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
CDKAL1-203ENST00000476517 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
CDKAL1-203ENST00000476517 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
CDKAL1-203ENST00000476517 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
CDKAL1-203ENST00000476517 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
CDKAL1-203ENST00000476517 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
CDKAL1-203ENST00000476517 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
CDKAL1-203ENST00000476517 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
CDKAL1-203ENST00000476517 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
CDKAL1-203ENST00000476517 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
CDKAL1-203ENST00000476517 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
CDKAL1-203ENST00000476517 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
CDKAL1-203ENST00000476517 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
CDKAL1-203ENST00000476517 NESP48681 1621 aa20.77■□□□□ 0.92
CDKAL1-203ENST00000476517 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
CDKAL1-203ENST00000476517 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
CDKAL1-203ENST00000476517 CFTRP13569 1480 aa20.67■□□□□ 0.9
CDKAL1-203ENST00000476517 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
CDKAL1-203ENST00000476517 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
CDKAL1-203ENST00000476517 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
CDKAL1-203ENST00000476517 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
CDKAL1-203ENST00000476517 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
CDKAL1-203ENST00000476517 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
CDKAL1-203ENST00000476517 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
CDKAL1-203ENST00000476517 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
CDKAL1-203ENST00000476517 MSH5O43196 834 aa20.48■□□□□ 0.87
CDKAL1-203ENST00000476517 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
CDKAL1-203ENST00000476517 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CDKAL1-203ENST00000476517 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
CDKAL1-203ENST00000476517 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
CDKAL1-203ENST00000476517 CUX1P39880 1505 aa20.37■□□□□ 0.85
CDKAL1-203ENST00000476517 EEA1Q15075 1411 aa20.35■□□□□ 0.85
CDKAL1-203ENST00000476517 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
CDKAL1-203ENST00000476517 WDR62O43379 1518 aa20.32■□□□□ 0.84
CDKAL1-203ENST00000476517 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
CDKAL1-203ENST00000476517 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
CDKAL1-203ENST00000476517 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
CDKAL1-203ENST00000476517 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
CDKAL1-203ENST00000476517 SOGA1O94964 1423 aa20.2■□□□□ 0.82
CDKAL1-203ENST00000476517 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
CDKAL1-203ENST00000476517 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
CDKAL1-203ENST00000476517 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
CDKAL1-203ENST00000476517 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
CDKAL1-203ENST00000476517 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
CDKAL1-203ENST00000476517 KIF21BO75037 1637 aa20.14■□□□□ 0.81
CDKAL1-203ENST00000476517 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
CDKAL1-203ENST00000476517 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
CDKAL1-203ENST00000476517 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
CDKAL1-203ENST00000476517 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
CDKAL1-203ENST00000476517 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
CDKAL1-203ENST00000476517 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
CDKAL1-203ENST00000476517 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
CDKAL1-203ENST00000476517 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
CDKAL1-203ENST00000476517 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
CDKAL1-203ENST00000476517 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
CDKAL1-203ENST00000476517 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
CDKAL1-203ENST00000476517 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
CDKAL1-203ENST00000476517 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
CDKAL1-203ENST00000476517 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
CDKAL1-203ENST00000476517 CUL7Q14999 1698 aa19.92■□□□□ 0.78
CDKAL1-203ENST00000476517 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
CDKAL1-203ENST00000476517 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
CDKAL1-203ENST00000476517 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
CDKAL1-203ENST00000476517 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
CDKAL1-203ENST00000476517 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
CDKAL1-203ENST00000476517 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
CDKAL1-203ENST00000476517 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
CDKAL1-203ENST00000476517 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
CDKAL1-203ENST00000476517 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms