RNA–Protein interactions for RNA: ENST00000476144.3

RN7SL41P-201, Transcript of RNA, 7SL, cytoplasmic 41, pseudogene, humanhuman

BASIC

Gene RN7SL41P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL41P-201ENST00000476144 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
RN7SL41P-201ENST00000476144 ABCC9O60706 1549 aa11.16□□□□□ -0.62
RN7SL41P-201ENST00000476144 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
RN7SL41P-201ENST00000476144 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
RN7SL41P-201ENST00000476144 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
RN7SL41P-201ENST00000476144 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
RN7SL41P-201ENST00000476144 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
RN7SL41P-201ENST00000476144 BICRAQ9NZM4 1560 aa10.1□□□□□ -0.79
RN7SL41P-201ENST00000476144 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
RN7SL41P-201ENST00000476144 CECR2Q9BXF3 1484 aa10.05□□□□□ -0.8
RN7SL41P-201ENST00000476144 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
RN7SL41P-201ENST00000476144 NACADO15069 1562 aa10.01□□□□□ -0.81
RN7SL41P-201ENST00000476144 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
RN7SL41P-201ENST00000476144 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
RN7SL41P-201ENST00000476144 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
RN7SL41P-201ENST00000476144 CUX2O14529 1486 aa9.69□□□□□ -0.86
RN7SL41P-201ENST00000476144 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
RN7SL41P-201ENST00000476144 SHROOM4Q9ULL8 1493 aa9.64□□□□□ -0.87
RN7SL41P-201ENST00000476144 AEBP2Q6ZN18 517 aaPredicted RBP9.63□□□□□ -0.87
RN7SL41P-201ENST00000476144 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
RN7SL41P-201ENST00000476144 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
RN7SL41P-201ENST00000476144 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
RN7SL41P-201ENST00000476144 NESP48681 1621 aa9.49□□□□□ -0.89
RN7SL41P-201ENST00000476144 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
RN7SL41P-201ENST00000476144 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
RN7SL41P-201ENST00000476144 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
RN7SL41P-201ENST00000476144 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
RN7SL41P-201ENST00000476144 SMARCA2P51531 1590 aa9.28□□□□□ -0.92
RN7SL41P-201ENST00000476144 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
RN7SL41P-201ENST00000476144 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
RN7SL41P-201ENST00000476144 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
RN7SL41P-201ENST00000476144 BAZ1AQ9NRL2 1556 aaPredicted RBP9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 TRHP20396 242 aaPredicted RBP9.15□□□□□ -0.94
RN7SL41P-201ENST00000476144 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
RN7SL41P-201ENST00000476144 HMGXB3Q12766 1538 aa9.13□□□□□ -0.95
RN7SL41P-201ENST00000476144 LAMC3Q9Y6N6 1575 aa9.12□□□□□ -0.95
RN7SL41P-201ENST00000476144 PDS5BQ9NTI5 1447 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 WDR62O43379 1518 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
RN7SL41P-201ENST00000476144 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
RN7SL41P-201ENST00000476144 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
RN7SL41P-201ENST00000476144 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
RN7SL41P-201ENST00000476144 CADPSQ9ULU8 1353 aa9.03□□□□□ -0.96
RN7SL41P-201ENST00000476144 ARAP1Q96P48 1450 aa9.01□□□□□ -0.97
RN7SL41P-201ENST00000476144 ZNF608Q9ULD9 1512 aaPredicted RBP8.97□□□□□ -0.97
RN7SL41P-201ENST00000476144 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
RN7SL41P-201ENST00000476144 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
RN7SL41P-201ENST00000476144 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
RN7SL41P-201ENST00000476144 MROH2BQ7Z745 1585 aa8.93□□□□□ -0.98
RN7SL41P-201ENST00000476144 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
RN7SL41P-201ENST00000476144 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
RN7SL41P-201ENST00000476144 CHD1O14646 1710 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 FBLN2P98095 1184 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 AQRO60306 1485 aaKnown RBP eCLIP8.81□□□□□ -1
RN7SL41P-201ENST00000476144 CFTRP13569 1480 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
RN7SL41P-201ENST00000476144 IFT140Q96RY7 1462 aa8.77□□□□□ -1
RN7SL41P-201ENST00000476144 WIZO95785 1651 aa8.77□□□□□ -1.01
RN7SL41P-201ENST00000476144 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
RN7SL41P-201ENST00000476144 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.01
RN7SL41P-201ENST00000476144 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
RN7SL41P-201ENST00000476144 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
RN7SL41P-201ENST00000476144 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
RN7SL41P-201ENST00000476144 GAPVD1Q14C86 1478 aa8.66□□□□□ -1.02
RN7SL41P-201ENST00000476144 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
RN7SL41P-201ENST00000476144 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
RN7SL41P-201ENST00000476144 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
RN7SL41P-201ENST00000476144 KIF13AQ9H1H9 1805 aa8.62□□□□□ -1.03
RN7SL41P-201ENST00000476144 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
RN7SL41P-201ENST00000476144 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
RN7SL41P-201ENST00000476144 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
RN7SL41P-201ENST00000476144 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
RN7SL41P-201ENST00000476144 SYNJ1O43426 1573 aa8.56□□□□□ -1.04
RN7SL41P-201ENST00000476144 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
RN7SL41P-201ENST00000476144 HECW2Q9P2P5 1572 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 FBXO41Q8TF61 875 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 SOGA1O94964 1423 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
RN7SL41P-201ENST00000476144 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
RN7SL41P-201ENST00000476144 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
RN7SL41P-201ENST00000476144 ADGRL1O94910 1474 aa8.49□□□□□ -1.05
RN7SL41P-201ENST00000476144 MAGI1Q96QZ7 1491 aaPredicted RBP8.49□□□□□ -1.05
RN7SL41P-201ENST00000476144 ABCC10Q5T3U5 1492 aa8.48□□□□□ -1.05
RN7SL41P-201ENST00000476144 CEP170Q5SW79 1584 aa8.48□□□□□ -1.05
RN7SL41P-201ENST00000476144 LMTK3Q96Q04 1460 aa8.47□□□□□ -1.05
RN7SL41P-201ENST00000476144 GRIN2BQ13224 1484 aa8.46□□□□□ -1.05
RN7SL41P-201ENST00000476144 KDM6BO15054 1643 aa8.46□□□□□ -1.06
RN7SL41P-201ENST00000476144 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
RN7SL41P-201ENST00000476144 SOCS7O14512 581 aa8.44□□□□□ -1.06
RN7SL41P-201ENST00000476144 DIP2BQ9P265 1576 aa8.44□□□□□ -1.06
RN7SL41P-201ENST00000476144 TSPOAP1O95153 1857 aa8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 PHF23Q9BUL5 403 aaPredicted RBP8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 CUX1P39880 1505 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms