RNA–Protein interactions for RNA: ENST00000476144.3

RN7SL41P-201, Transcript of RNA, 7SL, cytoplasmic 41, pseudogene, humanhuman

BASIC

Gene RN7SL41P, Length 297 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL41P-201ENST00000476144 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
RN7SL41P-201ENST00000476144 ABCC9O60706 1549 aa11.16□□□□□ -0.62
RN7SL41P-201ENST00000476144 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
RN7SL41P-201ENST00000476144 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
RN7SL41P-201ENST00000476144 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
RN7SL41P-201ENST00000476144 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
RN7SL41P-201ENST00000476144 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
RN7SL41P-201ENST00000476144 BICRAQ9NZM4 1560 aa10.1□□□□□ -0.79
RN7SL41P-201ENST00000476144 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
RN7SL41P-201ENST00000476144 CECR2Q9BXF3 1484 aa10.05□□□□□ -0.8
RN7SL41P-201ENST00000476144 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
RN7SL41P-201ENST00000476144 NACADO15069 1562 aa10.01□□□□□ -0.81
RN7SL41P-201ENST00000476144 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
RN7SL41P-201ENST00000476144 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
RN7SL41P-201ENST00000476144 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
RN7SL41P-201ENST00000476144 CUX2O14529 1486 aa9.69□□□□□ -0.86
RN7SL41P-201ENST00000476144 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
RN7SL41P-201ENST00000476144 SHROOM4Q9ULL8 1493 aa9.64□□□□□ -0.87
RN7SL41P-201ENST00000476144 AEBP2Q6ZN18 517 aaPredicted RBP9.63□□□□□ -0.87
RN7SL41P-201ENST00000476144 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
RN7SL41P-201ENST00000476144 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
RN7SL41P-201ENST00000476144 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
RN7SL41P-201ENST00000476144 NESP48681 1621 aa9.49□□□□□ -0.89
RN7SL41P-201ENST00000476144 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
RN7SL41P-201ENST00000476144 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
RN7SL41P-201ENST00000476144 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
RN7SL41P-201ENST00000476144 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
RN7SL41P-201ENST00000476144 SMARCA2P51531 1590 aa9.28□□□□□ -0.92
RN7SL41P-201ENST00000476144 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
RN7SL41P-201ENST00000476144 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
RN7SL41P-201ENST00000476144 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
RN7SL41P-201ENST00000476144 BAZ1AQ9NRL2 1556 aaPredicted RBP9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
RN7SL41P-201ENST00000476144 TRHP20396 242 aaPredicted RBP9.15□□□□□ -0.94
RN7SL41P-201ENST00000476144 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
RN7SL41P-201ENST00000476144 HMGXB3Q12766 1538 aa9.13□□□□□ -0.95
RN7SL41P-201ENST00000476144 LAMC3Q9Y6N6 1575 aa9.12□□□□□ -0.95
RN7SL41P-201ENST00000476144 PDS5BQ9NTI5 1447 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 WDR62O43379 1518 aa9.1□□□□□ -0.95
RN7SL41P-201ENST00000476144 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
RN7SL41P-201ENST00000476144 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
RN7SL41P-201ENST00000476144 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
RN7SL41P-201ENST00000476144 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
RN7SL41P-201ENST00000476144 CADPSQ9ULU8 1353 aa9.03□□□□□ -0.96
RN7SL41P-201ENST00000476144 ARAP1Q96P48 1450 aa9.01□□□□□ -0.97
RN7SL41P-201ENST00000476144 ZNF608Q9ULD9 1512 aaPredicted RBP8.97□□□□□ -0.97
RN7SL41P-201ENST00000476144 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
RN7SL41P-201ENST00000476144 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
RN7SL41P-201ENST00000476144 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
RN7SL41P-201ENST00000476144 MROH2BQ7Z745 1585 aa8.93□□□□□ -0.98
RN7SL41P-201ENST00000476144 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
RN7SL41P-201ENST00000476144 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
RN7SL41P-201ENST00000476144 CHD1O14646 1710 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 FBLN2P98095 1184 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 AQRO60306 1485 aaKnown RBP eCLIP8.81□□□□□ -1
RN7SL41P-201ENST00000476144 CFTRP13569 1480 aa8.81□□□□□ -1
RN7SL41P-201ENST00000476144 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
RN7SL41P-201ENST00000476144 IFT140Q96RY7 1462 aa8.77□□□□□ -1
RN7SL41P-201ENST00000476144 WIZO95785 1651 aa8.77□□□□□ -1.01
RN7SL41P-201ENST00000476144 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
RN7SL41P-201ENST00000476144 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.01
RN7SL41P-201ENST00000476144 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
RN7SL41P-201ENST00000476144 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
RN7SL41P-201ENST00000476144 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
RN7SL41P-201ENST00000476144 GAPVD1Q14C86 1478 aa8.66□□□□□ -1.02
RN7SL41P-201ENST00000476144 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
RN7SL41P-201ENST00000476144 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
RN7SL41P-201ENST00000476144 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
RN7SL41P-201ENST00000476144 KIF13AQ9H1H9 1805 aa8.62□□□□□ -1.03
RN7SL41P-201ENST00000476144 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
RN7SL41P-201ENST00000476144 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
RN7SL41P-201ENST00000476144 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
RN7SL41P-201ENST00000476144 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
RN7SL41P-201ENST00000476144 SYNJ1O43426 1573 aa8.56□□□□□ -1.04
RN7SL41P-201ENST00000476144 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
RN7SL41P-201ENST00000476144 HECW2Q9P2P5 1572 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 FBXO41Q8TF61 875 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 SOGA1O94964 1423 aa8.54□□□□□ -1.04
RN7SL41P-201ENST00000476144 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
RN7SL41P-201ENST00000476144 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
RN7SL41P-201ENST00000476144 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
RN7SL41P-201ENST00000476144 ADGRL1O94910 1474 aa8.49□□□□□ -1.05
RN7SL41P-201ENST00000476144 MAGI1Q96QZ7 1491 aaPredicted RBP8.49□□□□□ -1.05
RN7SL41P-201ENST00000476144 ABCC10Q5T3U5 1492 aa8.48□□□□□ -1.05
RN7SL41P-201ENST00000476144 CEP170Q5SW79 1584 aa8.48□□□□□ -1.05
RN7SL41P-201ENST00000476144 LMTK3Q96Q04 1460 aa8.47□□□□□ -1.05
RN7SL41P-201ENST00000476144 GRIN2BQ13224 1484 aa8.46□□□□□ -1.05
RN7SL41P-201ENST00000476144 KDM6BO15054 1643 aa8.46□□□□□ -1.06
RN7SL41P-201ENST00000476144 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
RN7SL41P-201ENST00000476144 SOCS7O14512 581 aa8.44□□□□□ -1.06
RN7SL41P-201ENST00000476144 DIP2BQ9P265 1576 aa8.44□□□□□ -1.06
RN7SL41P-201ENST00000476144 TSPOAP1O95153 1857 aa8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 PHF23Q9BUL5 403 aaPredicted RBP8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
RN7SL41P-201ENST00000476144 CUX1P39880 1505 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms