RNA–Protein interactions for RNA: ENST00000475502.1

ZIC4-210, Transcript of Zic family member 4, humanhuman

TSL 3

Gene ZIC4, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-210ENST00000475502 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
ZIC4-210ENST00000475502 CCDC180Q9P1Z9 1646 aa38.92■■■■□ 3.82
ZIC4-210ENST00000475502 ABCC9O60706 1549 aa37.64■■■■□ 3.62
ZIC4-210ENST00000475502 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
ZIC4-210ENST00000475502 NACADO15069 1562 aa36.52■■■■□ 3.44
ZIC4-210ENST00000475502 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
ZIC4-210ENST00000475502 RB1CC1Q8TDY2 1594 aa36.46■■■■□ 3.43
ZIC4-210ENST00000475502 DCAF8L2P0C7V8 631 aa36.44■■■■□ 3.42
ZIC4-210ENST00000475502 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
ZIC4-210ENST00000475502 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
ZIC4-210ENST00000475502 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
ZIC4-210ENST00000475502 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
ZIC4-210ENST00000475502 PABPN1Q86U42 306 aaKnown RBP eCLIP35.2■■■■□ 3.23
ZIC4-210ENST00000475502 SHROOM4Q9ULL8 1493 aa35.1■■■■□ 3.21
ZIC4-210ENST00000475502 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
ZIC4-210ENST00000475502 DNAJC5BQ9UF47 199 aa34.2■■■■□ 3.07
ZIC4-210ENST00000475502 CC2D2AQ9P2K1 1620 aa34.09■■■■□ 3.05
ZIC4-210ENST00000475502 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
ZIC4-210ENST00000475502 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
ZIC4-210ENST00000475502 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
ZIC4-210ENST00000475502 MROH2BQ7Z745 1585 aa33.78■■■■□ 3
ZIC4-210ENST00000475502 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
ZIC4-210ENST00000475502 ATAD2BQ9ULI0 1458 aa33.71■■■□□ 2.99
ZIC4-210ENST00000475502 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
ZIC4-210ENST00000475502 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
ZIC4-210ENST00000475502 HMGXB3Q12766 1538 aa33.55■■■□□ 2.96
ZIC4-210ENST00000475502 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
ZIC4-210ENST00000475502 BAZ1BQ9UIG0 1483 aaKnown RBP33.45■■■□□ 2.95
ZIC4-210ENST00000475502 WIZO95785 1651 aa33.42■■■□□ 2.94
ZIC4-210ENST00000475502 TOP2AP11388 1531 aaKnown RBP33.15■■■□□ 2.9
ZIC4-210ENST00000475502 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
ZIC4-210ENST00000475502 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
ZIC4-210ENST00000475502 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
ZIC4-210ENST00000475502 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
ZIC4-210ENST00000475502 NESP48681 1621 aa32.65■■■□□ 2.82
ZIC4-210ENST00000475502 CFTRP13569 1480 aa32.58■■■□□ 2.81
ZIC4-210ENST00000475502 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
ZIC4-210ENST00000475502 ERCC6Q03468 1493 aa32.47■■■□□ 2.79
ZIC4-210ENST00000475502 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
ZIC4-210ENST00000475502 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
ZIC4-210ENST00000475502 KIF21AQ7Z4S6 1674 aa32.29■■■□□ 2.76
ZIC4-210ENST00000475502 CEP164Q9UPV0 1460 aa32.24■■■□□ 2.75
ZIC4-210ENST00000475502 THOC2Q8NI27 1593 aaKnown RBP32.14■■■□□ 2.74
ZIC4-210ENST00000475502 MRC2Q9UBG0 1479 aa32.13■■■□□ 2.73
ZIC4-210ENST00000475502 CUX2O14529 1486 aa32.07■■■□□ 2.72
ZIC4-210ENST00000475502 WDR62O43379 1518 aa32.01■■■□□ 2.72
ZIC4-210ENST00000475502 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
ZIC4-210ENST00000475502 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
ZIC4-210ENST00000475502 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
ZIC4-210ENST00000475502 TOPBP1Q92547 1522 aa31.82■■■□□ 2.68
ZIC4-210ENST00000475502 CUX1P39880 1505 aa31.68■■■□□ 2.66
ZIC4-210ENST00000475502 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
ZIC4-210ENST00000475502 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
ZIC4-210ENST00000475502 POLA1P09884 1462 aaPredicted RBP31.57■■■□□ 2.64
ZIC4-210ENST00000475502 TOP2BQ02880 1626 aa31.54■■■□□ 2.64
ZIC4-210ENST00000475502 FGD5Q6ZNL6 1462 aa31.53■■■□□ 2.64
ZIC4-210ENST00000475502 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
ZIC4-210ENST00000475502 SYNJ1O43426 1573 aa31.49■■■□□ 2.63
ZIC4-210ENST00000475502 SOGA1O94964 1423 aa31.46■■■□□ 2.63
ZIC4-210ENST00000475502 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
ZIC4-210ENST00000475502 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
ZIC4-210ENST00000475502 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
ZIC4-210ENST00000475502 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
ZIC4-210ENST00000475502 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
ZIC4-210ENST00000475502 EIF4G3O43432 1585 aaKnown RBP31.24■■■□□ 2.59
ZIC4-210ENST00000475502 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.58
ZIC4-210ENST00000475502 TDRD9Q8NDG6 1382 aaKnown RBP31.18■■■□□ 2.58
ZIC4-210ENST00000475502 GAPVD1Q14C86 1478 aa31.11■■■□□ 2.57
ZIC4-210ENST00000475502 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
ZIC4-210ENST00000475502 ABCA5Q8WWZ7 1642 aa31.1■■■□□ 2.57
ZIC4-210ENST00000475502 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
ZIC4-210ENST00000475502 PBRM1Q86U86 1689 aa30.98■■■□□ 2.55
ZIC4-210ENST00000475502 MAGI1Q96QZ7 1491 aaPredicted RBP30.98■■■□□ 2.55
ZIC4-210ENST00000475502 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
ZIC4-210ENST00000475502 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
ZIC4-210ENST00000475502 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
ZIC4-210ENST00000475502 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
ZIC4-210ENST00000475502 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
ZIC4-210ENST00000475502 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
ZIC4-210ENST00000475502 IGF1RP08069 1367 aa30.79■■■□□ 2.52
ZIC4-210ENST00000475502 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
ZIC4-210ENST00000475502 CHMP7Q8WUX9 453 aaPredicted RBP30.78■■■□□ 2.52
ZIC4-210ENST00000475502 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
ZIC4-210ENST00000475502 CHD1O14646 1710 aa30.75■■■□□ 2.51
ZIC4-210ENST00000475502 FBLN2P98095 1184 aa30.74■■■□□ 2.51
ZIC4-210ENST00000475502 CUL7Q14999 1698 aa30.71■■■□□ 2.51
ZIC4-210ENST00000475502 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
ZIC4-210ENST00000475502 EEA1Q15075 1411 aa30.67■■■□□ 2.5
ZIC4-210ENST00000475502 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
ZIC4-210ENST00000475502 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
ZIC4-210ENST00000475502 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
ZIC4-210ENST00000475502 NUP160Q12769 1436 aa30.52■■■□□ 2.48
ZIC4-210ENST00000475502 CSRNP3Q8WYN3 585 aa30.5■■■□□ 2.47
ZIC4-210ENST00000475502 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
ZIC4-210ENST00000475502 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
ZIC4-210ENST00000475502 PRXQ9BXM0 1461 aa30.45■■■□□ 2.47
ZIC4-210ENST00000475502 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
ZIC4-210ENST00000475502 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
ZIC4-210ENST00000475502 KIAA0586Q9BVV6 1533 aa30.32■■■□□ 2.44
ZIC4-210ENST00000475502 KIF21BO75037 1637 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms