RNA–Protein interactions for RNA: ENST00000475434.1

LMOD3-202, Transcript of leiomodin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMOD3, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMOD3-202ENST00000475434 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
LMOD3-202ENST00000475434 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
LMOD3-202ENST00000475434 ABCC9O60706 1549 aa22.25■■□□□ 1.15
LMOD3-202ENST00000475434 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
LMOD3-202ENST00000475434 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
LMOD3-202ENST00000475434 NACADO15069 1562 aa21.26■□□□□ 0.99
LMOD3-202ENST00000475434 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
LMOD3-202ENST00000475434 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
LMOD3-202ENST00000475434 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
LMOD3-202ENST00000475434 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
LMOD3-202ENST00000475434 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.92
LMOD3-202ENST00000475434 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
LMOD3-202ENST00000475434 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
LMOD3-202ENST00000475434 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
LMOD3-202ENST00000475434 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
LMOD3-202ENST00000475434 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.81
LMOD3-202ENST00000475434 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
LMOD3-202ENST00000475434 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
LMOD3-202ENST00000475434 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
LMOD3-202ENST00000475434 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
LMOD3-202ENST00000475434 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
LMOD3-202ENST00000475434 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
LMOD3-202ENST00000475434 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
LMOD3-202ENST00000475434 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
LMOD3-202ENST00000475434 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
LMOD3-202ENST00000475434 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
LMOD3-202ENST00000475434 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
LMOD3-202ENST00000475434 WIZO95785 1651 aa19.43■□□□□ 0.7
LMOD3-202ENST00000475434 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
LMOD3-202ENST00000475434 NESP48681 1621 aa19.24■□□□□ 0.67
LMOD3-202ENST00000475434 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
LMOD3-202ENST00000475434 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
LMOD3-202ENST00000475434 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
LMOD3-202ENST00000475434 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
LMOD3-202ENST00000475434 PELP1Q8IZL8 1130 aaKnown RBP19.06■□□□□ 0.64
LMOD3-202ENST00000475434 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
LMOD3-202ENST00000475434 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
LMOD3-202ENST00000475434 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
LMOD3-202ENST00000475434 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
LMOD3-202ENST00000475434 CFTRP13569 1480 aa18.95■□□□□ 0.62
LMOD3-202ENST00000475434 CUX2O14529 1486 aa18.91■□□□□ 0.62
LMOD3-202ENST00000475434 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.62
LMOD3-202ENST00000475434 MYT1Q01538 1121 aa18.89■□□□□ 0.61
LMOD3-202ENST00000475434 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
LMOD3-202ENST00000475434 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
LMOD3-202ENST00000475434 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
LMOD3-202ENST00000475434 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
LMOD3-202ENST00000475434 WDR62O43379 1518 aa18.74■□□□□ 0.59
LMOD3-202ENST00000475434 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
LMOD3-202ENST00000475434 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
LMOD3-202ENST00000475434 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
LMOD3-202ENST00000475434 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
LMOD3-202ENST00000475434 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
LMOD3-202ENST00000475434 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
LMOD3-202ENST00000475434 CUX1P39880 1505 aa18.42■□□□□ 0.54
LMOD3-202ENST00000475434 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
LMOD3-202ENST00000475434 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
LMOD3-202ENST00000475434 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
LMOD3-202ENST00000475434 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
LMOD3-202ENST00000475434 SOGA1O94964 1423 aa18.35■□□□□ 0.53
LMOD3-202ENST00000475434 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
LMOD3-202ENST00000475434 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
LMOD3-202ENST00000475434 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
LMOD3-202ENST00000475434 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
LMOD3-202ENST00000475434 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
LMOD3-202ENST00000475434 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
LMOD3-202ENST00000475434 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
LMOD3-202ENST00000475434 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
LMOD3-202ENST00000475434 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
LMOD3-202ENST00000475434 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
LMOD3-202ENST00000475434 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
LMOD3-202ENST00000475434 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
LMOD3-202ENST00000475434 FBLN2P98095 1184 aa18.15■□□□□ 0.5
LMOD3-202ENST00000475434 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
LMOD3-202ENST00000475434 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
LMOD3-202ENST00000475434 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
LMOD3-202ENST00000475434 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
LMOD3-202ENST00000475434 CHD1O14646 1710 aa18.07■□□□□ 0.48
LMOD3-202ENST00000475434 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
LMOD3-202ENST00000475434 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
LMOD3-202ENST00000475434 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
LMOD3-202ENST00000475434 SYNJ2O15056 1496 aa18■□□□□ 0.47
LMOD3-202ENST00000475434 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
LMOD3-202ENST00000475434 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
LMOD3-202ENST00000475434 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
LMOD3-202ENST00000475434 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
LMOD3-202ENST00000475434 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
LMOD3-202ENST00000475434 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
LMOD3-202ENST00000475434 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
LMOD3-202ENST00000475434 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
LMOD3-202ENST00000475434 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
LMOD3-202ENST00000475434 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
LMOD3-202ENST00000475434 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
LMOD3-202ENST00000475434 IGF1RP08069 1367 aa17.85■□□□□ 0.45
LMOD3-202ENST00000475434 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
LMOD3-202ENST00000475434 NUP160Q12769 1436 aa17.79■□□□□ 0.44
LMOD3-202ENST00000475434 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
LMOD3-202ENST00000475434 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
LMOD3-202ENST00000475434 CUL7Q14999 1698 aa17.75■□□□□ 0.43
LMOD3-202ENST00000475434 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms