RNA–Protein interactions for RNA: ENST00000475217.1

KRT13-205, Transcript of keratin 13, humanhuman

TSL 3

Gene KRT13, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13-205ENST00000475217 NISCHQ9Y2I1 1504 aa33.98■■■■□ 3.03
KRT13-205ENST00000475217 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
KRT13-205ENST00000475217 ABCC9O60706 1549 aa29.25■■■□□ 2.27
KRT13-205ENST00000475217 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
KRT13-205ENST00000475217 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
KRT13-205ENST00000475217 NACADO15069 1562 aa28.21■■■□□ 2.11
KRT13-205ENST00000475217 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
KRT13-205ENST00000475217 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
KRT13-205ENST00000475217 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
KRT13-205ENST00000475217 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
KRT13-205ENST00000475217 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
KRT13-205ENST00000475217 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
KRT13-205ENST00000475217 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
KRT13-205ENST00000475217 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
KRT13-205ENST00000475217 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
KRT13-205ENST00000475217 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
KRT13-205ENST00000475217 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
KRT13-205ENST00000475217 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
KRT13-205ENST00000475217 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
KRT13-205ENST00000475217 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
KRT13-205ENST00000475217 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
KRT13-205ENST00000475217 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
KRT13-205ENST00000475217 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.79
KRT13-205ENST00000475217 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
KRT13-205ENST00000475217 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
KRT13-205ENST00000475217 NCAPD3P42695 1498 aa26.05■■□□□ 1.76
KRT13-205ENST00000475217 RSF1Q96T23 1441 aaPredicted RBP26.02■■□□□ 1.76
KRT13-205ENST00000475217 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
KRT13-205ENST00000475217 WIZO95785 1651 aa25.92■■□□□ 1.74
KRT13-205ENST00000475217 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
KRT13-205ENST00000475217 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
KRT13-205ENST00000475217 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
KRT13-205ENST00000475217 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
KRT13-205ENST00000475217 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
KRT13-205ENST00000475217 NESP48681 1621 aa25.37■■□□□ 1.65
KRT13-205ENST00000475217 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
KRT13-205ENST00000475217 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
KRT13-205ENST00000475217 CFTRP13569 1480 aa25.21■■□□□ 1.63
KRT13-205ENST00000475217 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
KRT13-205ENST00000475217 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
KRT13-205ENST00000475217 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
KRT13-205ENST00000475217 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
KRT13-205ENST00000475217 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
KRT13-205ENST00000475217 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
KRT13-205ENST00000475217 MRC2Q9UBG0 1479 aa24.88■■□□□ 1.57
KRT13-205ENST00000475217 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
KRT13-205ENST00000475217 CUX2O14529 1486 aa24.77■■□□□ 1.56
KRT13-205ENST00000475217 WDR62O43379 1518 aa24.76■■□□□ 1.55
KRT13-205ENST00000475217 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
KRT13-205ENST00000475217 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
KRT13-205ENST00000475217 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
KRT13-205ENST00000475217 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
KRT13-205ENST00000475217 CUX1P39880 1505 aa24.56■■□□□ 1.52
KRT13-205ENST00000475217 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
KRT13-205ENST00000475217 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
KRT13-205ENST00000475217 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.5
KRT13-205ENST00000475217 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
KRT13-205ENST00000475217 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
KRT13-205ENST00000475217 SOGA1O94964 1423 aa24.4■■□□□ 1.5
KRT13-205ENST00000475217 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
KRT13-205ENST00000475217 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
KRT13-205ENST00000475217 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
KRT13-205ENST00000475217 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
KRT13-205ENST00000475217 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
KRT13-205ENST00000475217 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
KRT13-205ENST00000475217 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.47
KRT13-205ENST00000475217 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
KRT13-205ENST00000475217 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
KRT13-205ENST00000475217 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
KRT13-205ENST00000475217 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
KRT13-205ENST00000475217 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
KRT13-205ENST00000475217 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
KRT13-205ENST00000475217 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
KRT13-205ENST00000475217 KIF27Q86VH2 1401 aa24■■□□□ 1.43
KRT13-205ENST00000475217 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
KRT13-205ENST00000475217 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
KRT13-205ENST00000475217 FBLN2P98095 1184 aa23.95■■□□□ 1.42
KRT13-205ENST00000475217 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
KRT13-205ENST00000475217 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
KRT13-205ENST00000475217 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
KRT13-205ENST00000475217 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
KRT13-205ENST00000475217 IGF1RP08069 1367 aa23.88■■□□□ 1.41
KRT13-205ENST00000475217 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
KRT13-205ENST00000475217 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
KRT13-205ENST00000475217 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
KRT13-205ENST00000475217 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
KRT13-205ENST00000475217 CHD1O14646 1710 aa23.82■■□□□ 1.4
KRT13-205ENST00000475217 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
KRT13-205ENST00000475217 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
KRT13-205ENST00000475217 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
KRT13-205ENST00000475217 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
KRT13-205ENST00000475217 CUL7Q14999 1698 aa23.72■■□□□ 1.39
KRT13-205ENST00000475217 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
KRT13-205ENST00000475217 CSRNP3Q8WYN3 585 aa23.68■■□□□ 1.38
KRT13-205ENST00000475217 EEA1Q15075 1411 aa23.67■■□□□ 1.38
KRT13-205ENST00000475217 NUP160Q12769 1436 aa23.62■■□□□ 1.37
KRT13-205ENST00000475217 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
KRT13-205ENST00000475217 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
KRT13-205ENST00000475217 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
KRT13-205ENST00000475217 CLASP1Q7Z460 1538 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms