RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
ERGIC3-213ENST00000475211 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
ERGIC3-213ENST00000475211 ABCC9O60706 1549 aa28.07■■■□□ 2.08
ERGIC3-213ENST00000475211 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
ERGIC3-213ENST00000475211 NACADO15069 1562 aa27.27■■□□□ 1.96
ERGIC3-213ENST00000475211 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
ERGIC3-213ENST00000475211 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
ERGIC3-213ENST00000475211 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
ERGIC3-213ENST00000475211 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
ERGIC3-213ENST00000475211 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
ERGIC3-213ENST00000475211 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
ERGIC3-213ENST00000475211 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
ERGIC3-213ENST00000475211 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
ERGIC3-213ENST00000475211 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
ERGIC3-213ENST00000475211 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
ERGIC3-213ENST00000475211 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
ERGIC3-213ENST00000475211 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
ERGIC3-213ENST00000475211 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
ERGIC3-213ENST00000475211 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
ERGIC3-213ENST00000475211 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
ERGIC3-213ENST00000475211 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
ERGIC3-213ENST00000475211 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
ERGIC3-213ENST00000475211 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
ERGIC3-213ENST00000475211 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
ERGIC3-213ENST00000475211 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
ERGIC3-213ENST00000475211 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
ERGIC3-213ENST00000475211 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
ERGIC3-213ENST00000475211 WIZO95785 1651 aa25.03■■□□□ 1.6
ERGIC3-213ENST00000475211 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
ERGIC3-213ENST00000475211 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
ERGIC3-213ENST00000475211 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
ERGIC3-213ENST00000475211 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
ERGIC3-213ENST00000475211 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
ERGIC3-213ENST00000475211 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
ERGIC3-213ENST00000475211 NESP48681 1621 aa24.37■■□□□ 1.49
ERGIC3-213ENST00000475211 CFTRP13569 1480 aa24.36■■□□□ 1.49
ERGIC3-213ENST00000475211 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
ERGIC3-213ENST00000475211 ERCC6Q03468 1493 aa24.2■■□□□ 1.47
ERGIC3-213ENST00000475211 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
ERGIC3-213ENST00000475211 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.46
ERGIC3-213ENST00000475211 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
ERGIC3-213ENST00000475211 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
ERGIC3-213ENST00000475211 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
ERGIC3-213ENST00000475211 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
ERGIC3-213ENST00000475211 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
ERGIC3-213ENST00000475211 WDR62O43379 1518 aa23.9■■□□□ 1.42
ERGIC3-213ENST00000475211 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
ERGIC3-213ENST00000475211 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
ERGIC3-213ENST00000475211 CUX2O14529 1486 aa23.85■■□□□ 1.41
ERGIC3-213ENST00000475211 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
ERGIC3-213ENST00000475211 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
ERGIC3-213ENST00000475211 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
ERGIC3-213ENST00000475211 CUX1P39880 1505 aa23.73■■□□□ 1.39
ERGIC3-213ENST00000475211 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
ERGIC3-213ENST00000475211 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
ERGIC3-213ENST00000475211 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
ERGIC3-213ENST00000475211 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
ERGIC3-213ENST00000475211 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
ERGIC3-213ENST00000475211 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
ERGIC3-213ENST00000475211 SOGA1O94964 1423 aa23.5■■□□□ 1.35
ERGIC3-213ENST00000475211 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
ERGIC3-213ENST00000475211 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
ERGIC3-213ENST00000475211 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
ERGIC3-213ENST00000475211 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
ERGIC3-213ENST00000475211 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
ERGIC3-213ENST00000475211 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
ERGIC3-213ENST00000475211 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
ERGIC3-213ENST00000475211 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
ERGIC3-213ENST00000475211 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■■■□□ 16.8
ERGIC3-213ENST00000475211 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
ERGIC3-213ENST00000475211 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
ERGIC3-213ENST00000475211 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
ERGIC3-213ENST00000475211 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
ERGIC3-213ENST00000475211 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
ERGIC3-213ENST00000475211 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
ERGIC3-213ENST00000475211 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
ERGIC3-213ENST00000475211 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
ERGIC3-213ENST00000475211 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
ERGIC3-213ENST00000475211 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
ERGIC3-213ENST00000475211 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
ERGIC3-213ENST00000475211 IGF1RP08069 1367 aa23.03■■□□□ 1.28
ERGIC3-213ENST00000475211 EEA1Q15075 1411 aa23.03■■□□□ 1.28
ERGIC3-213ENST00000475211 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
ERGIC3-213ENST00000475211 CUL7Q14999 1698 aa23.02■■□□□ 1.28
ERGIC3-213ENST00000475211 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
ERGIC3-213ENST00000475211 CHD1O14646 1710 aa22.96■■□□□ 1.27
ERGIC3-213ENST00000475211 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
ERGIC3-213ENST00000475211 FBLN2P98095 1184 aa22.93■■□□□ 1.26
ERGIC3-213ENST00000475211 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
ERGIC3-213ENST00000475211 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
ERGIC3-213ENST00000475211 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
ERGIC3-213ENST00000475211 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
ERGIC3-213ENST00000475211 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
ERGIC3-213ENST00000475211 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
ERGIC3-213ENST00000475211 NUP160Q12769 1436 aa22.81■■□□□ 1.24
ERGIC3-213ENST00000475211 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
ERGIC3-213ENST00000475211 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
ERGIC3-213ENST00000475211 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
ERGIC3-213ENST00000475211 KIF21BO75037 1637 aa22.75■■□□□ 1.23
ERGIC3-213ENST00000475211 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms