RNA–Protein interactions for RNA: ENST00000475126.5

CSTF2-204, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 1,693 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-204ENST00000475126 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
CSTF2-204ENST00000475126 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
CSTF2-204ENST00000475126 ABCC9O60706 1549 aa23.29■■□□□ 1.32
CSTF2-204ENST00000475126 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
CSTF2-204ENST00000475126 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
CSTF2-204ENST00000475126 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
CSTF2-204ENST00000475126 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
CSTF2-204ENST00000475126 NACADO15069 1562 aa22.69■■□□□ 1.22
CSTF2-204ENST00000475126 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
CSTF2-204ENST00000475126 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
CSTF2-204ENST00000475126 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
CSTF2-204ENST00000475126 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
CSTF2-204ENST00000475126 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
CSTF2-204ENST00000475126 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSTF2-204ENST00000475126 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
CSTF2-204ENST00000475126 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
CSTF2-204ENST00000475126 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
CSTF2-204ENST00000475126 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
CSTF2-204ENST00000475126 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
CSTF2-204ENST00000475126 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
CSTF2-204ENST00000475126 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
CSTF2-204ENST00000475126 WIZO95785 1651 aa21.23■□□□□ 0.99
CSTF2-204ENST00000475126 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
CSTF2-204ENST00000475126 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
CSTF2-204ENST00000475126 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
CSTF2-204ENST00000475126 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
CSTF2-204ENST00000475126 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
CSTF2-204ENST00000475126 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
CSTF2-204ENST00000475126 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
CSTF2-204ENST00000475126 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
CSTF2-204ENST00000475126 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
CSTF2-204ENST00000475126 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
CSTF2-204ENST00000475126 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
CSTF2-204ENST00000475126 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
CSTF2-204ENST00000475126 CFTRP13569 1480 aa20.44■□□□□ 0.86
CSTF2-204ENST00000475126 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
CSTF2-204ENST00000475126 NESP48681 1621 aa20.37■□□□□ 0.85
CSTF2-204ENST00000475126 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
CSTF2-204ENST00000475126 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
CSTF2-204ENST00000475126 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
CSTF2-204ENST00000475126 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
CSTF2-204ENST00000475126 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
CSTF2-204ENST00000475126 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
CSTF2-204ENST00000475126 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
CSTF2-204ENST00000475126 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
CSTF2-204ENST00000475126 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
CSTF2-204ENST00000475126 CUX1P39880 1505 aa20.08■□□□□ 0.8
CSTF2-204ENST00000475126 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
CSTF2-204ENST00000475126 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
CSTF2-204ENST00000475126 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
CSTF2-204ENST00000475126 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
CSTF2-204ENST00000475126 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
CSTF2-204ENST00000475126 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
CSTF2-204ENST00000475126 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
CSTF2-204ENST00000475126 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
CSTF2-204ENST00000475126 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
CSTF2-204ENST00000475126 SOGA1O94964 1423 aa19.87■□□□□ 0.77
CSTF2-204ENST00000475126 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
CSTF2-204ENST00000475126 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
CSTF2-204ENST00000475126 WDR62O43379 1518 aa19.84■□□□□ 0.77
CSTF2-204ENST00000475126 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
CSTF2-204ENST00000475126 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
CSTF2-204ENST00000475126 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
CSTF2-204ENST00000475126 CUX2O14529 1486 aa19.72■□□□□ 0.75
CSTF2-204ENST00000475126 EEA1Q15075 1411 aa19.71■□□□□ 0.75
CSTF2-204ENST00000475126 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
CSTF2-204ENST00000475126 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
CSTF2-204ENST00000475126 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
CSTF2-204ENST00000475126 WDR97A6NE52 1622 aa19.64■□□□□ 0.74
CSTF2-204ENST00000475126 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
CSTF2-204ENST00000475126 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
CSTF2-204ENST00000475126 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
CSTF2-204ENST00000475126 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
CSTF2-204ENST00000475126 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
CSTF2-204ENST00000475126 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
CSTF2-204ENST00000475126 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
CSTF2-204ENST00000475126 IGF1RP08069 1367 aa19.54■□□□□ 0.72
CSTF2-204ENST00000475126 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
CSTF2-204ENST00000475126 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
CSTF2-204ENST00000475126 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
CSTF2-204ENST00000475126 KIF21BO75037 1637 aa19.48■□□□□ 0.71
CSTF2-204ENST00000475126 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CSTF2-204ENST00000475126 EIF4G3O43432 1585 aaKnown RBP19.47■□□□□ 0.71
CSTF2-204ENST00000475126 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
CSTF2-204ENST00000475126 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
CSTF2-204ENST00000475126 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
CSTF2-204ENST00000475126 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
CSTF2-204ENST00000475126 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
CSTF2-204ENST00000475126 CUL7Q14999 1698 aa19.38■□□□□ 0.69
CSTF2-204ENST00000475126 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
CSTF2-204ENST00000475126 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
CSTF2-204ENST00000475126 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
CSTF2-204ENST00000475126 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.68
CSTF2-204ENST00000475126 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
CSTF2-204ENST00000475126 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
CSTF2-204ENST00000475126 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
CSTF2-204ENST00000475126 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
CSTF2-204ENST00000475126 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
CSTF2-204ENST00000475126 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
CSTF2-204ENST00000475126 FBLN2P98095 1184 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms