RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 NISCHQ9Y2I1 1504 aa54.97■■■■■ 6.39
YIF1A-206ENST00000474986 CCDC180Q9P1Z9 1646 aa48.72■■■■■ 5.39
YIF1A-206ENST00000474986 ABCC9O60706 1549 aa47.36■■■■■ 5.17
YIF1A-206ENST00000474986 ZCCHC6Q5VYS8 1495 aaKnown RBP45.87■■■■■ 4.93
YIF1A-206ENST00000474986 NACADO15069 1562 aa45.79■■■■■ 4.92
YIF1A-206ENST00000474986 RB1CC1Q8TDY2 1594 aa45.75■■■■■ 4.91
YIF1A-206ENST00000474986 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
YIF1A-206ENST00000474986 MYO15BQ96JP2 1530 aa45.69■■■■■ 4.9
YIF1A-206ENST00000474986 DCAF1Q9Y4B6 1507 aa45.57■■■■■ 4.89
YIF1A-206ENST00000474986 UNC13AQ9UPW8 1703 aa44.55■■■■■ 4.72
YIF1A-206ENST00000474986 SCRIBQ14160 1630 aa44.41■■■■■ 4.7
YIF1A-206ENST00000474986 BICRAQ9NZM4 1560 aa44.31■■■■■ 4.68
YIF1A-206ENST00000474986 PABPN1Q86U42 306 aaKnown RBP eCLIP44.3■■■■■ 4.68
YIF1A-206ENST00000474986 SHROOM4Q9ULL8 1493 aa44.02■■■■■ 4.64
YIF1A-206ENST00000474986 DNAJC5BQ9UF47 199 aa43.61■■■■■ 4.57
YIF1A-206ENST00000474986 EIF4G1Q04637 1599 aaKnown RBP43.14■■■■■ 4.5
YIF1A-206ENST00000474986 CC2D2AQ9P2K1 1620 aa42.86■■■■■ 4.45
YIF1A-206ENST00000474986 CECR2Q9BXF3 1484 aa42.74■■■■■ 4.43
YIF1A-206ENST00000474986 BAZ1AQ9NRL2 1556 aaPredicted RBP42.6■■■■■ 4.41
YIF1A-206ENST00000474986 SMARCA4P51532 1647 aa42.56■■■■■ 4.4
YIF1A-206ENST00000474986 MROH2BQ7Z745 1585 aa42.33■■■■■ 4.37
YIF1A-206ENST00000474986 ATAD2BQ9ULI0 1458 aa42.3■■■■■ 4.36
YIF1A-206ENST00000474986 SMARCA2P51531 1590 aa42.28■■■■■ 4.36
YIF1A-206ENST00000474986 NCAPD3P42695 1498 aa42.28■■■■■ 4.36
YIF1A-206ENST00000474986 PEG3Q9GZU2 1588 aa42.21■■■■■ 4.35
YIF1A-206ENST00000474986 HMGXB3Q12766 1538 aa42.07■■■■■ 4.33
YIF1A-206ENST00000474986 RSF1Q96T23 1441 aaPredicted RBP41.99■■■■■ 4.31
YIF1A-206ENST00000474986 BAZ1BQ9UIG0 1483 aaKnown RBP41.96■■■■■ 4.31
YIF1A-206ENST00000474986 WIZO95785 1651 aa41.83■■■■■ 4.29
YIF1A-206ENST00000474986 TOP2AP11388 1531 aaKnown RBP41.49■■■■■ 4.23
YIF1A-206ENST00000474986 LAMC3Q9Y6N6 1575 aa41.08■■■■■ 4.17
YIF1A-206ENST00000474986 NESP48681 1621 aa41.06■■■■■ 4.16
YIF1A-206ENST00000474986 SUPT5HO00267 1087 aaKnown RBP41.05■■■■■ 4.16
YIF1A-206ENST00000474986 CADPSQ9ULU8 1353 aa41.04■■■■■ 4.16
YIF1A-206ENST00000474986 CCDC88BA6NC98 1476 aa40.99■■■■■ 4.15
YIF1A-206ENST00000474986 CFTRP13569 1480 aa40.86■■■■■ 4.13
YIF1A-206ENST00000474986 ERCC6Q03468 1493 aa40.84■■■■■ 4.13
YIF1A-206ENST00000474986 PDS5BQ9NTI5 1447 aa40.83■■■■■ 4.13
YIF1A-206ENST00000474986 FANCD2Q9BXW9 1451 aa40.54■■■■■ 4.08
YIF1A-206ENST00000474986 KIF21AQ7Z4S6 1674 aa40.53■■■■■ 4.08
YIF1A-206ENST00000474986 CEP164Q9UPV0 1460 aa40.47■■■■■ 4.07
YIF1A-206ENST00000474986 PRDM2Q13029 1718 aa40.44■■■■■ 4.06
YIF1A-206ENST00000474986 THOC2Q8NI27 1593 aaKnown RBP40.4■■■■■ 4.06
YIF1A-206ENST00000474986 CUX2O14529 1486 aa40.37■■■■■ 4.05
YIF1A-206ENST00000474986 MRC2Q9UBG0 1479 aa40.36■■■■■ 4.05
YIF1A-206ENST00000474986 WDR62O43379 1518 aa40.21■■■■■ 4.03
YIF1A-206ENST00000474986 URB2Q14146 1524 aaKnown RBP40.09■■■■■ 4.01
YIF1A-206ENST00000474986 ABCC8Q09428 1581 aa40■■■■□ 3.99
YIF1A-206ENST00000474986 TOPBP1Q92547 1522 aa39.91■■■■□ 3.98
YIF1A-206ENST00000474986 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
YIF1A-206ENST00000474986 DNAJC5Q9H3Z4 198 aa39.72■■■■□ 3.95
YIF1A-206ENST00000474986 CUX1P39880 1505 aa39.7■■■■□ 3.95
YIF1A-206ENST00000474986 IFT140Q96RY7 1462 aa39.63■■■■□ 3.94
YIF1A-206ENST00000474986 POLA1P09884 1462 aaPredicted RBP39.61■■■■□ 3.93
YIF1A-206ENST00000474986 WRNQ14191 1432 aaPredicted RBP eCLIP39.59■■■■□ 3.93
YIF1A-206ENST00000474986 FGD5Q6ZNL6 1462 aa39.52■■■■□ 3.92
YIF1A-206ENST00000474986 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
YIF1A-206ENST00000474986 SOGA1O94964 1423 aa39.45■■■■□ 3.91
YIF1A-206ENST00000474986 TARBP1Q13395 1621 aaKnown RBP39.43■■■■□ 3.9
YIF1A-206ENST00000474986 BIVM-ERCC5R4GMW8 1640 aa39.42■■■■□ 3.9
YIF1A-206ENST00000474986 SYNJ1O43426 1573 aa39.4■■■■□ 3.9
YIF1A-206ENST00000474986 RAD54L2Q9Y4B4 1467 aa39.38■■■■□ 3.9
YIF1A-206ENST00000474986 ZNF608Q9ULD9 1512 aaPredicted RBP39.35■■■■□ 3.89
YIF1A-206ENST00000474986 WDR97A6NE52 1622 aa39.23■■■■□ 3.87
YIF1A-206ENST00000474986 EIF4G3O43432 1585 aaKnown RBP39.21■■■■□ 3.87
YIF1A-206ENST00000474986 ABCA10Q8WWZ4 1543 aa39.2■■■■□ 3.87
YIF1A-206ENST00000474986 AQRO60306 1485 aaKnown RBP eCLIP39.17■■■■□ 3.86
YIF1A-206ENST00000474986 TDRD9Q8NDG6 1382 aaKnown RBP39.17■■■■□ 3.86
YIF1A-206ENST00000474986 GAPVD1Q14C86 1478 aa39■■■■□ 3.83
YIF1A-206ENST00000474986 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
YIF1A-206ENST00000474986 ABCA5Q8WWZ7 1642 aa38.97■■■■□ 3.83
YIF1A-206ENST00000474986 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
YIF1A-206ENST00000474986 SNAPC4Q5SXM2 1469 aa38.84■■■■□ 3.81
YIF1A-206ENST00000474986 TRIM41Q8WV44 630 aa38.82■■■■□ 3.8
YIF1A-206ENST00000474986 PBRM1Q86U86 1689 aa38.8■■■■□ 3.8
YIF1A-206ENST00000474986 KIF27Q86VH2 1401 aa38.76■■■■□ 3.8
YIF1A-206ENST00000474986 ERICH3Q5RHP9 1530 aa38.74■■■■□ 3.79
YIF1A-206ENST00000474986 OSCARQ8IYS5 282 aa38.73■■■■□ 3.79
YIF1A-206ENST00000474986 SYNJ2O15056 1496 aa38.69■■■■□ 3.78
YIF1A-206ENST00000474986 FBLN2P98095 1184 aa38.64■■■■□ 3.78
YIF1A-206ENST00000474986 CHMP7Q8WUX9 453 aaPredicted RBP38.64■■■■□ 3.78
YIF1A-206ENST00000474986 CHD1O14646 1710 aa38.6■■■■□ 3.77
YIF1A-206ENST00000474986 FHAD1B1AJZ9 1412 aa38.59■■■■□ 3.77
YIF1A-206ENST00000474986 ADAMTS12P58397 1594 aa38.58■■■■□ 3.77
YIF1A-206ENST00000474986 IGF1RP08069 1367 aa38.56■■■■□ 3.76
YIF1A-206ENST00000474986 CHIC1Q5VXU3 224 aa38.53■■■■□ 3.76
YIF1A-206ENST00000474986 GRIN2AQ12879 1464 aa38.46■■■■□ 3.75
YIF1A-206ENST00000474986 CUL7Q14999 1698 aa38.4■■■■□ 3.74
YIF1A-206ENST00000474986 RUSC2Q8N2Y8 1516 aa38.38■■■■□ 3.74
YIF1A-206ENST00000474986 CARMIL1Q5VZK9 1371 aa38.33■■■■□ 3.73
YIF1A-206ENST00000474986 NUP160Q12769 1436 aa38.3■■■■□ 3.72
YIF1A-206ENST00000474986 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
YIF1A-206ENST00000474986 EEA1Q15075 1411 aa38.25■■■■□ 3.71
YIF1A-206ENST00000474986 CEP170Q5SW79 1584 aa38.21■■■■□ 3.71
YIF1A-206ENST00000474986 RAPGEF2Q9Y4G8 1499 aa38.14■■■■□ 3.7
YIF1A-206ENST00000474986 CSRNP3Q8WYN3 585 aa38.1■■■■□ 3.69
YIF1A-206ENST00000474986 PRXQ9BXM0 1461 aa38.09■■■■□ 3.69
YIF1A-206ENST00000474986 ARHGEF11O15085 1522 aa38.07■■■■□ 3.68
YIF1A-206ENST00000474986 KIAA0586Q9BVV6 1533 aa38.02■■■■□ 3.68
YIF1A-206ENST00000474986 RIMBP3CA6NJZ7 1639 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 339.7 ms