RNA–Protein interactions for RNA: ENST00000474912.1

C4B-208, Transcript of complement C4B (Chido blood group), humanhuman

TSL 2

Gene C4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4B-208ENST00000474912 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
C4B-208ENST00000474912 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
C4B-208ENST00000474912 ABCC9O60706 1549 aa24.86■■□□□ 1.57
C4B-208ENST00000474912 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
C4B-208ENST00000474912 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
C4B-208ENST00000474912 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
C4B-208ENST00000474912 NACADO15069 1562 aa23.81■■□□□ 1.4
C4B-208ENST00000474912 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
C4B-208ENST00000474912 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
C4B-208ENST00000474912 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
C4B-208ENST00000474912 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
C4B-208ENST00000474912 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
C4B-208ENST00000474912 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
C4B-208ENST00000474912 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
C4B-208ENST00000474912 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
C4B-208ENST00000474912 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
C4B-208ENST00000474912 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
C4B-208ENST00000474912 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
C4B-208ENST00000474912 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
C4B-208ENST00000474912 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
C4B-208ENST00000474912 SMARCA4P51532 1647 aa22.34■■□□□ 1.17
C4B-208ENST00000474912 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
C4B-208ENST00000474912 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
C4B-208ENST00000474912 WIZO95785 1651 aa22.15■■□□□ 1.14
C4B-208ENST00000474912 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
C4B-208ENST00000474912 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
C4B-208ENST00000474912 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
C4B-208ENST00000474912 NCAPD3P42695 1498 aa21.98■■□□□ 1.11
C4B-208ENST00000474912 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
C4B-208ENST00000474912 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
C4B-208ENST00000474912 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
C4B-208ENST00000474912 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
C4B-208ENST00000474912 CUX2O14529 1486 aa21.52■■□□□ 1.04
C4B-208ENST00000474912 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
C4B-208ENST00000474912 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
C4B-208ENST00000474912 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
C4B-208ENST00000474912 NESP48681 1621 aa21.38■■□□□ 1.01
C4B-208ENST00000474912 CFTRP13569 1480 aa21.36■■□□□ 1.01
C4B-208ENST00000474912 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
C4B-208ENST00000474912 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
C4B-208ENST00000474912 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
C4B-208ENST00000474912 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
C4B-208ENST00000474912 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
C4B-208ENST00000474912 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
C4B-208ENST00000474912 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
C4B-208ENST00000474912 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
C4B-208ENST00000474912 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
C4B-208ENST00000474912 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
C4B-208ENST00000474912 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
C4B-208ENST00000474912 CUX1P39880 1505 aa20.94■□□□□ 0.94
C4B-208ENST00000474912 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
C4B-208ENST00000474912 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
C4B-208ENST00000474912 WDR62O43379 1518 aa20.91■□□□□ 0.94
C4B-208ENST00000474912 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
C4B-208ENST00000474912 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
C4B-208ENST00000474912 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
C4B-208ENST00000474912 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
C4B-208ENST00000474912 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
C4B-208ENST00000474912 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
C4B-208ENST00000474912 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
C4B-208ENST00000474912 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
C4B-208ENST00000474912 SOGA1O94964 1423 aa20.68■□□□□ 0.9
C4B-208ENST00000474912 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
C4B-208ENST00000474912 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
C4B-208ENST00000474912 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
C4B-208ENST00000474912 RUSC2Q8N2Y8 1516 aa20.56■□□□□ 0.88
C4B-208ENST00000474912 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
C4B-208ENST00000474912 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
C4B-208ENST00000474912 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
C4B-208ENST00000474912 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
C4B-208ENST00000474912 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
C4B-208ENST00000474912 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
C4B-208ENST00000474912 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
C4B-208ENST00000474912 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
C4B-208ENST00000474912 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
C4B-208ENST00000474912 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
C4B-208ENST00000474912 EEA1Q15075 1411 aa20.39■□□□□ 0.85
C4B-208ENST00000474912 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
C4B-208ENST00000474912 IGF1RP08069 1367 aa20.38■□□□□ 0.85
C4B-208ENST00000474912 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
C4B-208ENST00000474912 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
C4B-208ENST00000474912 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
C4B-208ENST00000474912 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
C4B-208ENST00000474912 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
C4B-208ENST00000474912 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
C4B-208ENST00000474912 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
C4B-208ENST00000474912 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
C4B-208ENST00000474912 CUL7Q14999 1698 aa20.22■□□□□ 0.83
C4B-208ENST00000474912 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
C4B-208ENST00000474912 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
C4B-208ENST00000474912 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
C4B-208ENST00000474912 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
C4B-208ENST00000474912 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
C4B-208ENST00000474912 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
C4B-208ENST00000474912 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
C4B-208ENST00000474912 KIF21BO75037 1637 aa20.17■□□□□ 0.82
C4B-208ENST00000474912 FBLN2P98095 1184 aa20.16■□□□□ 0.82
C4B-208ENST00000474912 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
C4B-208ENST00000474912 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
C4B-208ENST00000474912 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms