RNA–Protein interactions for RNA: ENST00000474588.5

UMPS-205, Transcript of uridine monophosphate synthetase, humanhuman

TSL 1 (best)

Gene UMPS, Length 1,789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-205ENST00000474588 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
UMPS-205ENST00000474588 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
UMPS-205ENST00000474588 AEBP2Q6ZN18 517 aaPredicted RBP22.67■■□□□ 1.22
UMPS-205ENST00000474588 CCDC180Q9P1Z9 1646 aa22.48■■□□□ 1.19
UMPS-205ENST00000474588 ABCC9O60706 1549 aa21.54■■□□□ 1.04
UMPS-205ENST00000474588 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
UMPS-205ENST00000474588 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
UMPS-205ENST00000474588 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
UMPS-205ENST00000474588 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
UMPS-205ENST00000474588 NACADO15069 1562 aa21.01■□□□□ 0.95
UMPS-205ENST00000474588 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
UMPS-205ENST00000474588 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
UMPS-205ENST00000474588 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
UMPS-205ENST00000474588 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
UMPS-205ENST00000474588 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
UMPS-205ENST00000474588 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
UMPS-205ENST00000474588 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
UMPS-205ENST00000474588 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
UMPS-205ENST00000474588 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
UMPS-205ENST00000474588 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
UMPS-205ENST00000474588 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
UMPS-205ENST00000474588 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
UMPS-205ENST00000474588 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
UMPS-205ENST00000474588 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
UMPS-205ENST00000474588 WIZO95785 1651 aa19.66■□□□□ 0.74
UMPS-205ENST00000474588 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
UMPS-205ENST00000474588 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
UMPS-205ENST00000474588 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
UMPS-205ENST00000474588 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
UMPS-205ENST00000474588 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
UMPS-205ENST00000474588 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
UMPS-205ENST00000474588 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
UMPS-205ENST00000474588 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
UMPS-205ENST00000474588 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
UMPS-205ENST00000474588 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
UMPS-205ENST00000474588 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
UMPS-205ENST00000474588 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
UMPS-205ENST00000474588 CFTRP13569 1480 aa18.9■□□□□ 0.62
UMPS-205ENST00000474588 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.61
UMPS-205ENST00000474588 NESP48681 1621 aa18.82■□□□□ 0.6
UMPS-205ENST00000474588 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
UMPS-205ENST00000474588 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
UMPS-205ENST00000474588 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
UMPS-205ENST00000474588 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
UMPS-205ENST00000474588 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
UMPS-205ENST00000474588 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
UMPS-205ENST00000474588 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
UMPS-205ENST00000474588 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
UMPS-205ENST00000474588 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
UMPS-205ENST00000474588 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
UMPS-205ENST00000474588 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
UMPS-205ENST00000474588 CUX1P39880 1505 aa18.56■□□□□ 0.56
UMPS-205ENST00000474588 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
UMPS-205ENST00000474588 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
UMPS-205ENST00000474588 KCNA4P22459 653 aa18.5■□□□□ 0.55
UMPS-205ENST00000474588 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
UMPS-205ENST00000474588 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
UMPS-205ENST00000474588 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
UMPS-205ENST00000474588 TOPBP1Q92547 1522 aa18.46■□□□□ 0.54
UMPS-205ENST00000474588 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
UMPS-205ENST00000474588 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
UMPS-205ENST00000474588 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
UMPS-205ENST00000474588 SOGA1O94964 1423 aa18.37■□□□□ 0.53
UMPS-205ENST00000474588 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
UMPS-205ENST00000474588 ADRA2BP18089 450 aa18.35■□□□□ 0.53
UMPS-205ENST00000474588 WDR62O43379 1518 aa18.33■□□□□ 0.53
UMPS-205ENST00000474588 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
UMPS-205ENST00000474588 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
UMPS-205ENST00000474588 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
UMPS-205ENST00000474588 EEA1Q15075 1411 aa18.27■□□□□ 0.51
UMPS-205ENST00000474588 CUX2O14529 1486 aa18.25■□□□□ 0.51
UMPS-205ENST00000474588 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
UMPS-205ENST00000474588 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
UMPS-205ENST00000474588 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
UMPS-205ENST00000474588 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
UMPS-205ENST00000474588 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
UMPS-205ENST00000474588 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
UMPS-205ENST00000474588 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
UMPS-205ENST00000474588 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
UMPS-205ENST00000474588 IGF1RP08069 1367 aa18.1■□□□□ 0.49
UMPS-205ENST00000474588 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
UMPS-205ENST00000474588 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
UMPS-205ENST00000474588 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.499e-6■□□□□ 10.2
UMPS-205ENST00000474588 GAPVD1Q14C86 1478 aa18.08■□□□□ 0.49
UMPS-205ENST00000474588 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
UMPS-205ENST00000474588 KIF21BO75037 1637 aa18.03■□□□□ 0.48
UMPS-205ENST00000474588 GOLGA3Q08378 1498 aa18.02■□□□□ 0.48
UMPS-205ENST00000474588 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
UMPS-205ENST00000474588 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
UMPS-205ENST00000474588 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
UMPS-205ENST00000474588 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
UMPS-205ENST00000474588 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
UMPS-205ENST00000474588 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
UMPS-205ENST00000474588 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
UMPS-205ENST00000474588 CUL7Q14999 1698 aa17.96■□□□□ 0.47
UMPS-205ENST00000474588 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
UMPS-205ENST00000474588 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
UMPS-205ENST00000474588 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
UMPS-205ENST00000474588 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
UMPS-205ENST00000474588 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms