RNA–Protein interactions for RNA: ENST00000474496.5

TRAF3IP3-210, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 4

Gene TRAF3IP3, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-210ENST00000474496 NISCHQ9Y2I1 1504 aa25.07■■□□□ 1.6
TRAF3IP3-210ENST00000474496 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
TRAF3IP3-210ENST00000474496 ABCC9O60706 1549 aa21.52■■□□□ 1.04
TRAF3IP3-210ENST00000474496 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
TRAF3IP3-210ENST00000474496 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
TRAF3IP3-210ENST00000474496 NACADO15069 1562 aa20.79■□□□□ 0.92
TRAF3IP3-210ENST00000474496 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
TRAF3IP3-210ENST00000474496 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
TRAF3IP3-210ENST00000474496 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
TRAF3IP3-210ENST00000474496 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
TRAF3IP3-210ENST00000474496 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
TRAF3IP3-210ENST00000474496 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
TRAF3IP3-210ENST00000474496 SHROOM4Q9ULL8 1493 aa20.13■□□□□ 0.81
TRAF3IP3-210ENST00000474496 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
TRAF3IP3-210ENST00000474496 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
TRAF3IP3-210ENST00000474496 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
TRAF3IP3-210ENST00000474496 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
TRAF3IP3-210ENST00000474496 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
TRAF3IP3-210ENST00000474496 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
TRAF3IP3-210ENST00000474496 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
TRAF3IP3-210ENST00000474496 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.69
TRAF3IP3-210ENST00000474496 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
TRAF3IP3-210ENST00000474496 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
TRAF3IP3-210ENST00000474496 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
TRAF3IP3-210ENST00000474496 WIZO95785 1651 aa19.17■□□□□ 0.66
TRAF3IP3-210ENST00000474496 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
TRAF3IP3-210ENST00000474496 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
TRAF3IP3-210ENST00000474496 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
TRAF3IP3-210ENST00000474496 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
TRAF3IP3-210ENST00000474496 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
TRAF3IP3-210ENST00000474496 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
TRAF3IP3-210ENST00000474496 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
TRAF3IP3-210ENST00000474496 NESP48681 1621 aa18.66■□□□□ 0.58
TRAF3IP3-210ENST00000474496 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
TRAF3IP3-210ENST00000474496 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
TRAF3IP3-210ENST00000474496 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
TRAF3IP3-210ENST00000474496 CFTRP13569 1480 aa18.57■□□□□ 0.56
TRAF3IP3-210ENST00000474496 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
TRAF3IP3-210ENST00000474496 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
TRAF3IP3-210ENST00000474496 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
TRAF3IP3-210ENST00000474496 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
TRAF3IP3-210ENST00000474496 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
TRAF3IP3-210ENST00000474496 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
TRAF3IP3-210ENST00000474496 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
TRAF3IP3-210ENST00000474496 WDR62O43379 1518 aa18.22■□□□□ 0.51
TRAF3IP3-210ENST00000474496 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
TRAF3IP3-210ENST00000474496 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
TRAF3IP3-210ENST00000474496 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
TRAF3IP3-210ENST00000474496 CUX2O14529 1486 aa18.18■□□□□ 0.5
TRAF3IP3-210ENST00000474496 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
TRAF3IP3-210ENST00000474496 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
TRAF3IP3-210ENST00000474496 CUX1P39880 1505 aa18.13■□□□□ 0.49
TRAF3IP3-210ENST00000474496 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
TRAF3IP3-210ENST00000474496 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
TRAF3IP3-210ENST00000474496 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
TRAF3IP3-210ENST00000474496 POLA1P09884 1462 aaPredicted RBP18.03■□□□□ 0.48
TRAF3IP3-210ENST00000474496 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
TRAF3IP3-210ENST00000474496 SOGA1O94964 1423 aa18.01■□□□□ 0.47
TRAF3IP3-210ENST00000474496 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
TRAF3IP3-210ENST00000474496 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
TRAF3IP3-210ENST00000474496 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
TRAF3IP3-210ENST00000474496 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
TRAF3IP3-210ENST00000474496 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
TRAF3IP3-210ENST00000474496 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
TRAF3IP3-210ENST00000474496 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
TRAF3IP3-210ENST00000474496 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRAF3IP3-210ENST00000474496 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
TRAF3IP3-210ENST00000474496 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
TRAF3IP3-210ENST00000474496 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
TRAF3IP3-210ENST00000474496 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
TRAF3IP3-210ENST00000474496 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
TRAF3IP3-210ENST00000474496 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
TRAF3IP3-210ENST00000474496 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
TRAF3IP3-210ENST00000474496 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
TRAF3IP3-210ENST00000474496 FBLN2P98095 1184 aa17.72■□□□□ 0.43
TRAF3IP3-210ENST00000474496 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
TRAF3IP3-210ENST00000474496 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
TRAF3IP3-210ENST00000474496 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP3-210ENST00000474496 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP3-210ENST00000474496 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
TRAF3IP3-210ENST00000474496 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
TRAF3IP3-210ENST00000474496 IGF1RP08069 1367 aa17.6■□□□□ 0.41
TRAF3IP3-210ENST00000474496 EEA1Q15075 1411 aa17.6■□□□□ 0.41
TRAF3IP3-210ENST00000474496 ADAMTS12P58397 1594 aa17.59■□□□□ 0.41
TRAF3IP3-210ENST00000474496 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
TRAF3IP3-210ENST00000474496 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
TRAF3IP3-210ENST00000474496 CUL7Q14999 1698 aa17.58■□□□□ 0.41
TRAF3IP3-210ENST00000474496 CHD1O14646 1710 aa17.58■□□□□ 0.4
TRAF3IP3-210ENST00000474496 CARMIL1Q5VZK9 1371 aa17.56■□□□□ 0.4
TRAF3IP3-210ENST00000474496 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
TRAF3IP3-210ENST00000474496 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
TRAF3IP3-210ENST00000474496 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
TRAF3IP3-210ENST00000474496 GRIN2AQ12879 1464 aa17.51■□□□□ 0.39
TRAF3IP3-210ENST00000474496 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
TRAF3IP3-210ENST00000474496 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
TRAF3IP3-210ENST00000474496 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
TRAF3IP3-210ENST00000474496 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
TRAF3IP3-210ENST00000474496 NUP160Q12769 1436 aa17.38■□□□□ 0.37
TRAF3IP3-210ENST00000474496 KIF21BO75037 1637 aa17.37■□□□□ 0.37
TRAF3IP3-210ENST00000474496 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms