RNA–Protein interactions for RNA: ENST00000474198.1

GRIA1-204, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 2

Gene GRIA1, Length 734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-204ENST00000474198 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
GRIA1-204ENST00000474198 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
GRIA1-204ENST00000474198 NISCHQ9Y2I1 1504 aa13.86□□□□□ -0.19
GRIA1-204ENST00000474198 ABCC9O60706 1549 aa13.47□□□□□ -0.25
GRIA1-204ENST00000474198 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
GRIA1-204ENST00000474198 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
GRIA1-204ENST00000474198 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
GRIA1-204ENST00000474198 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
GRIA1-204ENST00000474198 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.41
GRIA1-204ENST00000474198 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
GRIA1-204ENST00000474198 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
GRIA1-204ENST00000474198 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
GRIA1-204ENST00000474198 NACADO15069 1562 aa12.25□□□□□ -0.45
GRIA1-204ENST00000474198 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
GRIA1-204ENST00000474198 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
GRIA1-204ENST00000474198 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
GRIA1-204ENST00000474198 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
GRIA1-204ENST00000474198 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
GRIA1-204ENST00000474198 CUX2O14529 1486 aa11.94□□□□□ -0.5
GRIA1-204ENST00000474198 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
GRIA1-204ENST00000474198 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
GRIA1-204ENST00000474198 FOXD1Q16676 465 aa11.84□□□□□ -0.51
GRIA1-204ENST00000474198 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
GRIA1-204ENST00000474198 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
GRIA1-204ENST00000474198 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
GRIA1-204ENST00000474198 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
GRIA1-204ENST00000474198 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
GRIA1-204ENST00000474198 NESP48681 1621 aa11.38□□□□□ -0.59
GRIA1-204ENST00000474198 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
GRIA1-204ENST00000474198 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
GRIA1-204ENST00000474198 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
GRIA1-204ENST00000474198 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
GRIA1-204ENST00000474198 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
GRIA1-204ENST00000474198 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
GRIA1-204ENST00000474198 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
GRIA1-204ENST00000474198 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
GRIA1-204ENST00000474198 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
GRIA1-204ENST00000474198 MSH5O43196 834 aa11.21□□□□□ -0.61
GRIA1-204ENST00000474198 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
GRIA1-204ENST00000474198 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
GRIA1-204ENST00000474198 ATAD2BQ9ULI0 1458 aa11.17□□□□□ -0.62
GRIA1-204ENST00000474198 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
GRIA1-204ENST00000474198 WDR62O43379 1518 aa11.13□□□□□ -0.63
GRIA1-204ENST00000474198 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
GRIA1-204ENST00000474198 MRC2Q9UBG0 1479 aa11.08□□□□□ -0.64
GRIA1-204ENST00000474198 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
GRIA1-204ENST00000474198 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
GRIA1-204ENST00000474198 PLPPR3Q6T4P5 718 aa11.02□□□□□ -0.65
GRIA1-204ENST00000474198 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
GRIA1-204ENST00000474198 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
GRIA1-204ENST00000474198 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
GRIA1-204ENST00000474198 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
GRIA1-204ENST00000474198 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
GRIA1-204ENST00000474198 ARAP1Q96P48 1450 aa10.94□□□□□ -0.66
GRIA1-204ENST00000474198 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
GRIA1-204ENST00000474198 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
GRIA1-204ENST00000474198 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
GRIA1-204ENST00000474198 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
GRIA1-204ENST00000474198 ADRA2BP18089 450 aa10.83□□□□□ -0.68
GRIA1-204ENST00000474198 CHD1O14646 1710 aa10.81□□□□□ -0.68
GRIA1-204ENST00000474198 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
GRIA1-204ENST00000474198 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
GRIA1-204ENST00000474198 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.68
GRIA1-204ENST00000474198 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
GRIA1-204ENST00000474198 EIF4G3O43432 1585 aaKnown RBP10.71□□□□□ -0.69
GRIA1-204ENST00000474198 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
GRIA1-204ENST00000474198 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
GRIA1-204ENST00000474198 CFTRP13569 1480 aa10.64□□□□□ -0.71
GRIA1-204ENST00000474198 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
GRIA1-204ENST00000474198 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
GRIA1-204ENST00000474198 KIF13AQ9H1H9 1805 aa10.6□□□□□ -0.71
GRIA1-204ENST00000474198 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
GRIA1-204ENST00000474198 WIZO95785 1651 aa10.55□□□□□ -0.72
GRIA1-204ENST00000474198 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
GRIA1-204ENST00000474198 ERCC6L2Q5T890 1561 aa10.53□□□□□ -0.72
GRIA1-204ENST00000474198 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.72
GRIA1-204ENST00000474198 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
GRIA1-204ENST00000474198 FBLN2P98095 1184 aa10.52□□□□□ -0.73
GRIA1-204ENST00000474198 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.73
GRIA1-204ENST00000474198 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
GRIA1-204ENST00000474198 HECW2Q9P2P5 1572 aa10.48□□□□□ -0.73
GRIA1-204ENST00000474198 DNMBPQ6XZF7 1577 aa10.44□□□□□ -0.74
GRIA1-204ENST00000474198 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
GRIA1-204ENST00000474198 FBXO41Q8TF61 875 aa10.43□□□□□ -0.74
GRIA1-204ENST00000474198 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
GRIA1-204ENST00000474198 KDM6BO15054 1643 aa10.41□□□□□ -0.74
GRIA1-204ENST00000474198 ABCC8Q09428 1581 aa10.41□□□□□ -0.74
GRIA1-204ENST00000474198 POLA1P09884 1462 aaPredicted RBP10.37□□□□□ -0.75
GRIA1-204ENST00000474198 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
GRIA1-204ENST00000474198 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
GRIA1-204ENST00000474198 ADGRL1O94910 1474 aa10.35□□□□□ -0.75
GRIA1-204ENST00000474198 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
GRIA1-204ENST00000474198 SYNJ2O15056 1496 aa10.34□□□□□ -0.75
GRIA1-204ENST00000474198 SOCS7O14512 581 aa10.33□□□□□ -0.76
GRIA1-204ENST00000474198 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
GRIA1-204ENST00000474198 RAD54L2Q9Y4B4 1467 aa10.33□□□□□ -0.76
GRIA1-204ENST00000474198 DIP2BQ9P265 1576 aa10.33□□□□□ -0.76
GRIA1-204ENST00000474198 ABCC10Q5T3U5 1492 aa10.32□□□□□ -0.76
GRIA1-204ENST00000474198 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
GRIA1-204ENST00000474198 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms