RNA–Protein interactions for RNA: ENST00000474026.5

CAPN2-206, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 4,130 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-206ENST00000474026 NISCHQ9Y2I1 1504 aa10.66□□□□□ -0.7
CAPN2-206ENST00000474026 CCDC180Q9P1Z9 1646 aa9.3□□□□□ -0.92
CAPN2-206ENST00000474026 ZCCHC6Q5VYS8 1495 aaKnown RBP9.17□□□□□ -0.94
CAPN2-206ENST00000474026 DCAF1Q9Y4B6 1507 aa8.98□□□□□ -0.97
CAPN2-206ENST00000474026 MYO15BQ96JP2 1530 aa8.9□□□□□ -0.99
CAPN2-206ENST00000474026 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
CAPN2-206ENST00000474026 ABCC9O60706 1549 aa8.73□□□□□ -1.01
CAPN2-206ENST00000474026 UNC13AQ9UPW8 1703 aa8.67□□□□□ -1.02
CAPN2-206ENST00000474026 NACADO15069 1562 aa8.5□□□□□ -1.05
CAPN2-206ENST00000474026 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.05
CAPN2-206ENST00000474026 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
CAPN2-206ENST00000474026 WIZO95785 1651 aa8.36□□□□□ -1.07
CAPN2-206ENST00000474026 SHROOM4Q9ULL8 1493 aa8.34□□□□□ -1.07
CAPN2-206ENST00000474026 BAZ1AQ9NRL2 1556 aaPredicted RBP8.34□□□□□ -1.07
CAPN2-206ENST00000474026 BICRAQ9NZM4 1560 aa8.33□□□□□ -1.08
CAPN2-206ENST00000474026 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
CAPN2-206ENST00000474026 MROH2BQ7Z745 1585 aa8.32□□□□□ -1.08
CAPN2-206ENST00000474026 CHIC1Q5VXU3 224 aa8.31□□□□□ -1.08
CAPN2-206ENST00000474026 SCRIBQ14160 1630 aa8.31□□□□□ -1.08
CAPN2-206ENST00000474026 PEG3Q9GZU2 1588 aa8.3□□□□□ -1.08
CAPN2-206ENST00000474026 CECR2Q9BXF3 1484 aa8.28□□□□□ -1.08
CAPN2-206ENST00000474026 SMARCA2P51531 1590 aa8.21□□□□□ -1.1
CAPN2-206ENST00000474026 SMARCA4P51532 1647 aa8.19□□□□□ -1.1
CAPN2-206ENST00000474026 DCAF8L2P0C7V8 631 aa8.16□□□□□ -1.1
CAPN2-206ENST00000474026 TOP2AP11388 1531 aaKnown RBP8.12□□□□□ -1.11
CAPN2-206ENST00000474026 PCGF6Q9BYE7 350 aa8.1□□□□□ -1.11
CAPN2-206ENST00000474026 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
CAPN2-206ENST00000474026 HRCP23327 699 aa8.05□□□□□ -1.12
CAPN2-206ENST00000474026 PPARGC1BQ86YN6 1023 aaKnown RBP8.03□□□□□ -1.12
CAPN2-206ENST00000474026 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
CAPN2-206ENST00000474026 SYNJ1O43426 1573 aa8.02□□□□□ -1.13
CAPN2-206ENST00000474026 ABCC8Q09428 1581 aa8.01□□□□□ -1.13
CAPN2-206ENST00000474026 CCDC88BA6NC98 1476 aa7.99□□□□□ -1.13
CAPN2-206ENST00000474026 WRNQ14191 1432 aaPredicted RBP eCLIP7.96□□□□□ -1.14
CAPN2-206ENST00000474026 RUSC2Q8N2Y8 1516 aa7.95□□□□□ -1.14
CAPN2-206ENST00000474026 LRRIQ1Q96JM4 1722 aa7.95□□□□□ -1.14
CAPN2-206ENST00000474026 KIF21BO75037 1637 aa7.94□□□□□ -1.14
CAPN2-206ENST00000474026 LOC105371045A0A1W2PR82 267 aa7.92□□□□□ -1.14
CAPN2-206ENST00000474026 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
CAPN2-206ENST00000474026 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
CAPN2-206ENST00000474026 TOP2BQ02880 1626 aa7.88□□□□□ -1.15
CAPN2-206ENST00000474026 SOGA1O94964 1423 aa7.82□□□□□ -1.16
CAPN2-206ENST00000474026 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
CAPN2-206ENST00000474026 HMGXB3Q12766 1538 aa7.77□□□□□ -1.17
CAPN2-206ENST00000474026 ATAD2BQ9ULI0 1458 aa7.77□□□□□ -1.17
CAPN2-206ENST00000474026 CUX2O14529 1486 aa7.75□□□□□ -1.17
CAPN2-206ENST00000474026 CUX1P39880 1505 aa7.75□□□□□ -1.17
CAPN2-206ENST00000474026 KDM5BQ9UGL1 1544 aa7.73□□□□□ -1.17
CAPN2-206ENST00000474026 ARAP1Q96P48 1450 aa7.72□□□□□ -1.17
CAPN2-206ENST00000474026 PRXQ9BXM0 1461 aa7.72□□□□□ -1.17
CAPN2-206ENST00000474026 CFAP43Q8NDM7 1665 aa7.71□□□□□ -1.18
CAPN2-206ENST00000474026 ERICH3Q5RHP9 1530 aa7.7□□□□□ -1.18
CAPN2-206ENST00000474026 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
CAPN2-206ENST00000474026 BAZ1BQ9UIG0 1483 aaKnown RBP7.66□□□□□ -1.18
CAPN2-206ENST00000474026 TTBK1Q5TCY1 1321 aaPredicted RBP7.66□□□□□ -1.18
CAPN2-206ENST00000474026 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.18
CAPN2-206ENST00000474026 CEP162Q5TB80 1403 aa7.65□□□□□ -1.18
CAPN2-206ENST00000474026 RAPGEF2Q9Y4G8 1499 aa7.65□□□□□ -1.19
CAPN2-206ENST00000474026 MAPKBP1O60336 1514 aa7.64□□□□□ -1.19
CAPN2-206ENST00000474026 NCAPD3P42695 1498 aa7.63□□□□□ -1.19
CAPN2-206ENST00000474026 DENND4BO75064 1496 aaPredicted RBP7.62□□□□□ -1.19
CAPN2-206ENST00000474026 CFTRP13569 1480 aa7.61□□□□□ -1.19
CAPN2-206ENST00000474026 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
CAPN2-206ENST00000474026 ABCA5Q8WWZ7 1642 aa7.6□□□□□ -1.19
CAPN2-206ENST00000474026 SAMD9Q5K651 1589 aa7.59□□□□□ -1.19
CAPN2-206ENST00000474026 CTTNBP2Q8WZ74 1663 aa7.58□□□□□ -1.2
CAPN2-206ENST00000474026 ARHGEF11O15085 1522 aa7.58□□□□□ -1.2
CAPN2-206ENST00000474026 CLIP1P30622 1438 aa7.58□□□□□ -1.2
CAPN2-206ENST00000474026 SCAF1Q9H7N4 1312 aaKnown RBP7.58□□□□□ -1.2
CAPN2-206ENST00000474026 EEA1Q15075 1411 aa7.57□□□□□ -1.2
CAPN2-206ENST00000474026 ZEB1P37275 1124 aaPredicted RBP7.56□□□□□ -1.2
CAPN2-206ENST00000474026 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
CAPN2-206ENST00000474026 PELP1Q8IZL8 1130 aaKnown RBP7.55□□□□□ -1.2
CAPN2-206ENST00000474026 RRBP1Q9P2E9 1410 aaKnown RBP7.55□□□□□ -1.2
CAPN2-206ENST00000474026 ARHGAP35Q9NRY4 1499 aa7.54□□□□□ -1.2
CAPN2-206ENST00000474026 TARBP1Q13395 1621 aaKnown RBP7.54□□□□□ -1.2
CAPN2-206ENST00000474026 CCER1Q8TC90 406 aaPredicted RBP7.54□□□□□ -1.2
CAPN2-206ENST00000474026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.54□□□□□ -1.2
CAPN2-206ENST00000474026 GOLGA3Q08378 1498 aa7.53□□□□□ -1.2
CAPN2-206ENST00000474026 POLR1AO95602 1720 aaPredicted RBP7.52□□□□□ -1.21
CAPN2-206ENST00000474026 SNAPC4Q5SXM2 1469 aa7.51□□□□□ -1.21
CAPN2-206ENST00000474026 MAGI3Q5TCQ9 1506 aa7.5□□□□□ -1.21
CAPN2-206ENST00000474026 YTHDC1Q96MU7 727 aaKnown RBP7.5□□□□□ -1.21
CAPN2-206ENST00000474026 VPS8Q8N3P4 1428 aa7.5□□□□□ -1.21
CAPN2-206ENST00000474026 PABPN1Q86U42 306 aaKnown RBP eCLIP7.5□□□□□ -1.21
CAPN2-206ENST00000474026 CEP164Q9UPV0 1460 aa7.49□□□□□ -1.21
CAPN2-206ENST00000474026 TIAM1Q13009 1591 aa7.49□□□□□ -1.21
CAPN2-206ENST00000474026 PCF11O94913 1555 aaKnown RBP7.49□□□□□ -1.21
CAPN2-206ENST00000474026 KIF21AQ7Z4S6 1674 aa7.48□□□□□ -1.21
CAPN2-206ENST00000474026 KDM6BO15054 1643 aa7.48□□□□□ -1.21
CAPN2-206ENST00000474026 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
CAPN2-206ENST00000474026 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
CAPN2-206ENST00000474026 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
CAPN2-206ENST00000474026 GCC2Q8IWJ2 1684 aa7.45□□□□□ -1.22
CAPN2-206ENST00000474026 NEUROD1Q13562 356 aa7.44□□□□□ -1.22
CAPN2-206ENST00000474026 CENPBP07199 599 aaPredicted RBP7.42□□□□□ -1.22
CAPN2-206ENST00000474026 CUL7Q14999 1698 aa7.41□□□□□ -1.22
CAPN2-206ENST00000474026 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
CAPN2-206ENST00000474026 DHX57Q6P158 1386 aaKnown RBP7.41□□□□□ -1.22
CAPN2-206ENST00000474026 LAMC3Q9Y6N6 1575 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms