RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
TRAIP-204ENST00000473863 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
TRAIP-204ENST00000473863 ABCC9O60706 1549 aa26.89■■□□□ 1.89
TRAIP-204ENST00000473863 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
TRAIP-204ENST00000473863 DNAJC5BQ9UF47 199 aa26.35■■□□□ 1.81
TRAIP-204ENST00000473863 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
TRAIP-204ENST00000473863 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
TRAIP-204ENST00000473863 NACADO15069 1562 aa26.11■■□□□ 1.77
TRAIP-204ENST00000473863 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
TRAIP-204ENST00000473863 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
TRAIP-204ENST00000473863 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
TRAIP-204ENST00000473863 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
TRAIP-204ENST00000473863 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
TRAIP-204ENST00000473863 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
TRAIP-204ENST00000473863 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
TRAIP-204ENST00000473863 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
TRAIP-204ENST00000473863 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
TRAIP-204ENST00000473863 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
TRAIP-204ENST00000473863 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
TRAIP-204ENST00000473863 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
TRAIP-204ENST00000473863 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
TRAIP-204ENST00000473863 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
TRAIP-204ENST00000473863 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
TRAIP-204ENST00000473863 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
TRAIP-204ENST00000473863 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
TRAIP-204ENST00000473863 WIZO95785 1651 aa24.13■■□□□ 1.45
TRAIP-204ENST00000473863 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
TRAIP-204ENST00000473863 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
TRAIP-204ENST00000473863 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
TRAIP-204ENST00000473863 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
TRAIP-204ENST00000473863 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
TRAIP-204ENST00000473863 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
TRAIP-204ENST00000473863 CUX2O14529 1486 aa23.62■■□□□ 1.37
TRAIP-204ENST00000473863 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
TRAIP-204ENST00000473863 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
TRAIP-204ENST00000473863 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
TRAIP-204ENST00000473863 CFTRP13569 1480 aa23.36■■□□□ 1.33
TRAIP-204ENST00000473863 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
TRAIP-204ENST00000473863 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
TRAIP-204ENST00000473863 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
TRAIP-204ENST00000473863 NESP48681 1621 aa23.2■■□□□ 1.3
TRAIP-204ENST00000473863 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
TRAIP-204ENST00000473863 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
TRAIP-204ENST00000473863 KIF21AQ7Z4S6 1674 aa23.04■■□□□ 1.28
TRAIP-204ENST00000473863 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
TRAIP-204ENST00000473863 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
TRAIP-204ENST00000473863 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
TRAIP-204ENST00000473863 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
TRAIP-204ENST00000473863 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
TRAIP-204ENST00000473863 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
TRAIP-204ENST00000473863 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
TRAIP-204ENST00000473863 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
TRAIP-204ENST00000473863 CUX1P39880 1505 aa22.83■■□□□ 1.25
TRAIP-204ENST00000473863 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
TRAIP-204ENST00000473863 WDR62O43379 1518 aa22.82■■□□□ 1.24
TRAIP-204ENST00000473863 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
TRAIP-204ENST00000473863 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
TRAIP-204ENST00000473863 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
TRAIP-204ENST00000473863 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
TRAIP-204ENST00000473863 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
TRAIP-204ENST00000473863 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
TRAIP-204ENST00000473863 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
TRAIP-204ENST00000473863 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
TRAIP-204ENST00000473863 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
TRAIP-204ENST00000473863 SOGA1O94964 1423 aa22.48■■□□□ 1.19
TRAIP-204ENST00000473863 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
TRAIP-204ENST00000473863 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
TRAIP-204ENST00000473863 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
TRAIP-204ENST00000473863 EEA1Q15075 1411 aa22.38■■□□□ 1.17
TRAIP-204ENST00000473863 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
TRAIP-204ENST00000473863 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
TRAIP-204ENST00000473863 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
TRAIP-204ENST00000473863 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
TRAIP-204ENST00000473863 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
TRAIP-204ENST00000473863 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
TRAIP-204ENST00000473863 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
TRAIP-204ENST00000473863 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
TRAIP-204ENST00000473863 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
TRAIP-204ENST00000473863 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
TRAIP-204ENST00000473863 CUL7Q14999 1698 aa22.2■■□□□ 1.15
TRAIP-204ENST00000473863 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.146e-9■■■■■ 45.1
TRAIP-204ENST00000473863 RIMBP3CA6NJZ7 1639 aa22.19■■□□□ 1.14
TRAIP-204ENST00000473863 RIMBP3BA6NNM3 1639 aa22.19■■□□□ 1.14
TRAIP-204ENST00000473863 RIMBP3Q9UFD9 1639 aa22.19■■□□□ 1.14
TRAIP-204ENST00000473863 IGF1RP08069 1367 aa22.14■■□□□ 1.14
TRAIP-204ENST00000473863 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
TRAIP-204ENST00000473863 KIF21BO75037 1637 aa22.13■■□□□ 1.13
TRAIP-204ENST00000473863 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
TRAIP-204ENST00000473863 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
TRAIP-204ENST00000473863 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
TRAIP-204ENST00000473863 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
TRAIP-204ENST00000473863 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
TRAIP-204ENST00000473863 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
TRAIP-204ENST00000473863 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
TRAIP-204ENST00000473863 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
TRAIP-204ENST00000473863 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
TRAIP-204ENST00000473863 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
TRAIP-204ENST00000473863 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
TRAIP-204ENST00000473863 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
TRAIP-204ENST00000473863 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms