RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
DUBR-203ENST00000473550 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
DUBR-203ENST00000473550 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
DUBR-203ENST00000473550 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
DUBR-203ENST00000473550 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
DUBR-203ENST00000473550 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
DUBR-203ENST00000473550 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
DUBR-203ENST00000473550 ABCC9O60706 1549 aa18.79■□□□□ 0.6
DUBR-203ENST00000473550 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
DUBR-203ENST00000473550 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
DUBR-203ENST00000473550 NACADO15069 1562 aa18.55■□□□□ 0.56
DUBR-203ENST00000473550 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
DUBR-203ENST00000473550 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
DUBR-203ENST00000473550 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
DUBR-203ENST00000473550 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
DUBR-203ENST00000473550 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
DUBR-203ENST00000473550 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
DUBR-203ENST00000473550 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
DUBR-203ENST00000473550 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
DUBR-203ENST00000473550 FOXD1Q16676 465 aa17.59■□□□□ 0.41
DUBR-203ENST00000473550 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
DUBR-203ENST00000473550 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
DUBR-203ENST00000473550 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
DUBR-203ENST00000473550 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
DUBR-203ENST00000473550 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
DUBR-203ENST00000473550 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
DUBR-203ENST00000473550 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
DUBR-203ENST00000473550 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
DUBR-203ENST00000473550 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
DUBR-203ENST00000473550 WIZO95785 1651 aa17.15■□□□□ 0.34
DUBR-203ENST00000473550 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
DUBR-203ENST00000473550 ADRA2BP18089 450 aa17.12■□□□□ 0.33
DUBR-203ENST00000473550 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
DUBR-203ENST00000473550 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
DUBR-203ENST00000473550 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
DUBR-203ENST00000473550 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
DUBR-203ENST00000473550 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
DUBR-203ENST00000473550 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
DUBR-203ENST00000473550 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
DUBR-203ENST00000473550 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
DUBR-203ENST00000473550 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
DUBR-203ENST00000473550 CFTRP13569 1480 aa16.61■□□□□ 0.25
DUBR-203ENST00000473550 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
DUBR-203ENST00000473550 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
DUBR-203ENST00000473550 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
DUBR-203ENST00000473550 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
DUBR-203ENST00000473550 NESP48681 1621 aa16.39■□□□□ 0.21
DUBR-203ENST00000473550 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
DUBR-203ENST00000473550 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
DUBR-203ENST00000473550 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
DUBR-203ENST00000473550 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
DUBR-203ENST00000473550 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
DUBR-203ENST00000473550 MSH5O43196 834 aa16.29■□□□□ 0.2
DUBR-203ENST00000473550 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
DUBR-203ENST00000473550 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.2
DUBR-203ENST00000473550 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
DUBR-203ENST00000473550 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
DUBR-203ENST00000473550 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
DUBR-203ENST00000473550 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
DUBR-203ENST00000473550 CUX1P39880 1505 aa16.22■□□□□ 0.19
DUBR-203ENST00000473550 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
DUBR-203ENST00000473550 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
DUBR-203ENST00000473550 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
DUBR-203ENST00000473550 WDR62O43379 1518 aa16.13■□□□□ 0.17
DUBR-203ENST00000473550 EEA1Q15075 1411 aa16.11■□□□□ 0.17
DUBR-203ENST00000473550 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
DUBR-203ENST00000473550 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
DUBR-203ENST00000473550 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
DUBR-203ENST00000473550 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
DUBR-203ENST00000473550 SOGA1O94964 1423 aa16.03■□□□□ 0.16
DUBR-203ENST00000473550 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
DUBR-203ENST00000473550 KCNA4P22459 653 aa16■□□□□ 0.15
DUBR-203ENST00000473550 WDR97A6NE52 1622 aa16■□□□□ 0.15
DUBR-203ENST00000473550 KIF27Q86VH2 1401 aa16■□□□□ 0.15
DUBR-203ENST00000473550 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
DUBR-203ENST00000473550 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
DUBR-203ENST00000473550 CUX2O14529 1486 aa15.96■□□□□ 0.14
DUBR-203ENST00000473550 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
DUBR-203ENST00000473550 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
DUBR-203ENST00000473550 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
DUBR-203ENST00000473550 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
DUBR-203ENST00000473550 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
DUBR-203ENST00000473550 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
DUBR-203ENST00000473550 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
DUBR-203ENST00000473550 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
DUBR-203ENST00000473550 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
DUBR-203ENST00000473550 KIF21BO75037 1637 aa15.83■□□□□ 0.13
DUBR-203ENST00000473550 CUL7Q14999 1698 aa15.83■□□□□ 0.12
DUBR-203ENST00000473550 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
DUBR-203ENST00000473550 IGF1RP08069 1367 aa15.81■□□□□ 0.12
DUBR-203ENST00000473550 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
DUBR-203ENST00000473550 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
DUBR-203ENST00000473550 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
DUBR-203ENST00000473550 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
DUBR-203ENST00000473550 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
DUBR-203ENST00000473550 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
DUBR-203ENST00000473550 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.11
DUBR-203ENST00000473550 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
DUBR-203ENST00000473550 RAPGEF2Q9Y4G8 1499 aa15.74■□□□□ 0.11
DUBR-203ENST00000473550 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms