RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
NR1H3-218ENST00000473222 CCDC180Q9P1Z9 1646 aa37.35■■■■□ 3.57
NR1H3-218ENST00000473222 ABCC9O60706 1549 aa36.15■■■■□ 3.38
NR1H3-218ENST00000473222 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
NR1H3-218ENST00000473222 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
NR1H3-218ENST00000473222 NACADO15069 1562 aa35.06■■■■□ 3.2
NR1H3-218ENST00000473222 MYO15BQ96JP2 1530 aa35.02■■■■□ 3.2
NR1H3-218ENST00000473222 DCAF1Q9Y4B6 1507 aa35.02■■■■□ 3.2
NR1H3-218ENST00000473222 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
NR1H3-218ENST00000473222 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
NR1H3-218ENST00000473222 SCRIBQ14160 1630 aa34.07■■■■□ 3.04
NR1H3-218ENST00000473222 BICRAQ9NZM4 1560 aa33.92■■■■□ 3.02
NR1H3-218ENST00000473222 PABPN1Q86U42 306 aaKnown RBP eCLIP33.91■■■■□ 3.02
NR1H3-218ENST00000473222 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
NR1H3-218ENST00000473222 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
NR1H3-218ENST00000473222 DNAJC5BQ9UF47 199 aa32.92■■■□□ 2.86
NR1H3-218ENST00000473222 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
NR1H3-218ENST00000473222 CC2D2AQ9P2K1 1620 aa32.72■■■□□ 2.83
NR1H3-218ENST00000473222 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.83
NR1H3-218ENST00000473222 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
NR1H3-218ENST00000473222 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
NR1H3-218ENST00000473222 ATAD2BQ9ULI0 1458 aa32.43■■■□□ 2.78
NR1H3-218ENST00000473222 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
NR1H3-218ENST00000473222 NCAPD3P42695 1498 aa32.39■■■□□ 2.78
NR1H3-218ENST00000473222 SMARCA2P51531 1590 aa32.39■■■□□ 2.78
NR1H3-218ENST00000473222 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
NR1H3-218ENST00000473222 WIZO95785 1651 aa32.23■■■□□ 2.75
NR1H3-218ENST00000473222 HMGXB3Q12766 1538 aa32.19■■■□□ 2.74
NR1H3-218ENST00000473222 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
NR1H3-218ENST00000473222 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
NR1H3-218ENST00000473222 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
NR1H3-218ENST00000473222 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
NR1H3-218ENST00000473222 CADPSQ9ULU8 1353 aa31.46■■■□□ 2.63
NR1H3-218ENST00000473222 NESP48681 1621 aa31.42■■■□□ 2.62
NR1H3-218ENST00000473222 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
NR1H3-218ENST00000473222 CFTRP13569 1480 aa31.34■■■□□ 2.61
NR1H3-218ENST00000473222 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
NR1H3-218ENST00000473222 ERCC6Q03468 1493 aa31.1■■■□□ 2.57
NR1H3-218ENST00000473222 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
NR1H3-218ENST00000473222 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
NR1H3-218ENST00000473222 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
NR1H3-218ENST00000473222 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.54
NR1H3-218ENST00000473222 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
NR1H3-218ENST00000473222 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
NR1H3-218ENST00000473222 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
NR1H3-218ENST00000473222 WDR62O43379 1518 aa30.69■■■□□ 2.5
NR1H3-218ENST00000473222 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
NR1H3-218ENST00000473222 CUX2O14529 1486 aa30.65■■■□□ 2.5
NR1H3-218ENST00000473222 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
NR1H3-218ENST00000473222 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
NR1H3-218ENST00000473222 CUX1P39880 1505 aa30.52■■■□□ 2.48
NR1H3-218ENST00000473222 WRNQ14191 1432 aaPredicted RBP eCLIP30.5■■■□□ 2.47
NR1H3-218ENST00000473222 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
NR1H3-218ENST00000473222 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
NR1H3-218ENST00000473222 SYNJ1O43426 1573 aa30.36■■■□□ 2.45
NR1H3-218ENST00000473222 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
NR1H3-218ENST00000473222 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
NR1H3-218ENST00000473222 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
NR1H3-218ENST00000473222 SOGA1O94964 1423 aa30.3■■■□□ 2.44
NR1H3-218ENST00000473222 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
NR1H3-218ENST00000473222 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
NR1H3-218ENST00000473222 TRIM41Q8WV44 630 aa30.14■■■□□ 2.42
NR1H3-218ENST00000473222 ZNF608Q9ULD9 1512 aaPredicted RBP30.13■■■□□ 2.41
NR1H3-218ENST00000473222 ABCA10Q8WWZ4 1543 aa30.1■■■□□ 2.41
NR1H3-218ENST00000473222 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
NR1H3-218ENST00000473222 TDRD9Q8NDG6 1382 aaKnown RBP30.07■■■□□ 2.4
NR1H3-218ENST00000473222 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
NR1H3-218ENST00000473222 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.41e-7■■■□□ 16.7
NR1H3-218ENST00000473222 EIF4G3O43432 1585 aaKnown RBP29.97■■■□□ 2.39
NR1H3-218ENST00000473222 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
NR1H3-218ENST00000473222 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
NR1H3-218ENST00000473222 GRIN2BQ13224 1484 aa29.86■■■□□ 2.37
NR1H3-218ENST00000473222 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
NR1H3-218ENST00000473222 PBRM1Q86U86 1689 aa29.77■■■□□ 2.36
NR1H3-218ENST00000473222 ERICH3Q5RHP9 1530 aa29.74■■■□□ 2.35
NR1H3-218ENST00000473222 IGF1RP08069 1367 aa29.74■■■□□ 2.35
NR1H3-218ENST00000473222 MAGI1Q96QZ7 1491 aaPredicted RBP29.73■■■□□ 2.35
NR1H3-218ENST00000473222 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
NR1H3-218ENST00000473222 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
NR1H3-218ENST00000473222 CHMP7Q8WUX9 453 aaPredicted RBP29.62■■■□□ 2.33
NR1H3-218ENST00000473222 FBLN2P98095 1184 aa29.61■■■□□ 2.33
NR1H3-218ENST00000473222 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
NR1H3-218ENST00000473222 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
NR1H3-218ENST00000473222 EEA1Q15075 1411 aa29.56■■■□□ 2.32
NR1H3-218ENST00000473222 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
NR1H3-218ENST00000473222 ADAMTS12P58397 1594 aa29.55■■■□□ 2.32
NR1H3-218ENST00000473222 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
NR1H3-218ENST00000473222 CSRNP3Q8WYN3 585 aa29.54■■■□□ 2.32
NR1H3-218ENST00000473222 CHD1O14646 1710 aa29.54■■■□□ 2.32
NR1H3-218ENST00000473222 CUL7Q14999 1698 aa29.51■■■□□ 2.31
NR1H3-218ENST00000473222 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
NR1H3-218ENST00000473222 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
NR1H3-218ENST00000473222 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
NR1H3-218ENST00000473222 RAPGEF2Q9Y4G8 1499 aa29.37■■■□□ 2.29
NR1H3-218ENST00000473222 DNAJC5Q9H3Z4 198 aa29.33■■■□□ 2.29
NR1H3-218ENST00000473222 NUP160Q12769 1436 aa29.33■■■□□ 2.29
NR1H3-218ENST00000473222 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
NR1H3-218ENST00000473222 CLASP1Q7Z460 1538 aa29.24■■■□□ 2.27
NR1H3-218ENST00000473222 KIAA0586Q9BVV6 1533 aa29.18■■■□□ 2.26
NR1H3-218ENST00000473222 KIF21BO75037 1637 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms