RNA–Protein interactions for RNA: ENST00000472429.1

GRIK1-208, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 1 (best)

Gene GRIK1, Length 1,775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-208ENST00000472429 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
GRIK1-208ENST00000472429 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
GRIK1-208ENST00000472429 ABCC9O60706 1549 aa30.47■■■□□ 2.47
GRIK1-208ENST00000472429 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
GRIK1-208ENST00000472429 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
GRIK1-208ENST00000472429 NACADO15069 1562 aa29.39■■■□□ 2.3
GRIK1-208ENST00000472429 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
GRIK1-208ENST00000472429 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
GRIK1-208ENST00000472429 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
GRIK1-208ENST00000472429 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
GRIK1-208ENST00000472429 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
GRIK1-208ENST00000472429 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
GRIK1-208ENST00000472429 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
GRIK1-208ENST00000472429 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
GRIK1-208ENST00000472429 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
GRIK1-208ENST00000472429 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
GRIK1-208ENST00000472429 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
GRIK1-208ENST00000472429 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
GRIK1-208ENST00000472429 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
GRIK1-208ENST00000472429 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
GRIK1-208ENST00000472429 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
GRIK1-208ENST00000472429 SMARCA4P51532 1647 aa27.44■■□□□ 1.98
GRIK1-208ENST00000472429 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
GRIK1-208ENST00000472429 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
GRIK1-208ENST00000472429 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
GRIK1-208ENST00000472429 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
GRIK1-208ENST00000472429 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
GRIK1-208ENST00000472429 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
GRIK1-208ENST00000472429 WIZO95785 1651 aa27.09■■□□□ 1.93
GRIK1-208ENST00000472429 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
GRIK1-208ENST00000472429 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
GRIK1-208ENST00000472429 HRCP23327 699 aa26.82■■□□□ 1.88
GRIK1-208ENST00000472429 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
GRIK1-208ENST00000472429 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
GRIK1-208ENST00000472429 PCGF6Q9BYE7 350 aa26.63■■□□□ 1.85
GRIK1-208ENST00000472429 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
GRIK1-208ENST00000472429 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
GRIK1-208ENST00000472429 NESP48681 1621 aa26.47■■□□□ 1.83
GRIK1-208ENST00000472429 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
GRIK1-208ENST00000472429 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
GRIK1-208ENST00000472429 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
GRIK1-208ENST00000472429 CFTRP13569 1480 aa26.3■■□□□ 1.8
GRIK1-208ENST00000472429 ERCC6Q03468 1493 aa26.22■■□□□ 1.79
GRIK1-208ENST00000472429 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
GRIK1-208ENST00000472429 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
GRIK1-208ENST00000472429 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
GRIK1-208ENST00000472429 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
GRIK1-208ENST00000472429 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
GRIK1-208ENST00000472429 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
GRIK1-208ENST00000472429 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
GRIK1-208ENST00000472429 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
GRIK1-208ENST00000472429 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
GRIK1-208ENST00000472429 ZEB1P37275 1124 aaPredicted RBP25.87■■□□□ 1.73
GRIK1-208ENST00000472429 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
GRIK1-208ENST00000472429 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
GRIK1-208ENST00000472429 WDR62O43379 1518 aa25.8■■□□□ 1.72
GRIK1-208ENST00000472429 CUX2O14529 1486 aa25.75■■□□□ 1.71
GRIK1-208ENST00000472429 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
GRIK1-208ENST00000472429 EEA1Q15075 1411 aa25.69■■□□□ 1.7
GRIK1-208ENST00000472429 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
GRIK1-208ENST00000472429 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
GRIK1-208ENST00000472429 CUX1P39880 1505 aa25.66■■□□□ 1.7
GRIK1-208ENST00000472429 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
GRIK1-208ENST00000472429 SOGA1O94964 1423 aa25.56■■□□□ 1.68
GRIK1-208ENST00000472429 TNIKQ9UKE5 1360 aa25.54■■□□□ 1.68
GRIK1-208ENST00000472429 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
GRIK1-208ENST00000472429 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
GRIK1-208ENST00000472429 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
GRIK1-208ENST00000472429 CEP162Q5TB80 1403 aa25.5■■□□□ 1.67
GRIK1-208ENST00000472429 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
GRIK1-208ENST00000472429 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
GRIK1-208ENST00000472429 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
GRIK1-208ENST00000472429 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
GRIK1-208ENST00000472429 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
GRIK1-208ENST00000472429 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
GRIK1-208ENST00000472429 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
GRIK1-208ENST00000472429 TARBP1Q13395 1621 aaKnown RBP25.38■■□□□ 1.65
GRIK1-208ENST00000472429 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
GRIK1-208ENST00000472429 KIF21BO75037 1637 aa25.33■■□□□ 1.65
GRIK1-208ENST00000472429 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
GRIK1-208ENST00000472429 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
GRIK1-208ENST00000472429 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
GRIK1-208ENST00000472429 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
GRIK1-208ENST00000472429 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
GRIK1-208ENST00000472429 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
GRIK1-208ENST00000472429 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
GRIK1-208ENST00000472429 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
GRIK1-208ENST00000472429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
GRIK1-208ENST00000472429 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
GRIK1-208ENST00000472429 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
GRIK1-208ENST00000472429 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
GRIK1-208ENST00000472429 CLIP1P30622 1438 aa25.03■■□□□ 1.6
GRIK1-208ENST00000472429 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
GRIK1-208ENST00000472429 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
GRIK1-208ENST00000472429 VPS8Q8N3P4 1428 aa24.99■■□□□ 1.59
GRIK1-208ENST00000472429 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
GRIK1-208ENST00000472429 FBLN2P98095 1184 aa24.96■■□□□ 1.59
GRIK1-208ENST00000472429 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
GRIK1-208ENST00000472429 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
GRIK1-208ENST00000472429 IGF1RP08069 1367 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms