RNA–Protein interactions for RNA: ENST00000472420.5

LRPPRC-208, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-208ENST00000472420 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
LRPPRC-208ENST00000472420 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
LRPPRC-208ENST00000472420 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
LRPPRC-208ENST00000472420 ABCC9O60706 1549 aa18.99■□□□□ 0.63
LRPPRC-208ENST00000472420 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
LRPPRC-208ENST00000472420 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
LRPPRC-208ENST00000472420 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
LRPPRC-208ENST00000472420 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
LRPPRC-208ENST00000472420 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
LRPPRC-208ENST00000472420 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
LRPPRC-208ENST00000472420 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
LRPPRC-208ENST00000472420 NACADO15069 1562 aa17.21■□□□□ 0.35
LRPPRC-208ENST00000472420 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
LRPPRC-208ENST00000472420 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
LRPPRC-208ENST00000472420 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
LRPPRC-208ENST00000472420 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
LRPPRC-208ENST00000472420 CUX2O14529 1486 aa16.89■□□□□ 0.29
LRPPRC-208ENST00000472420 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
LRPPRC-208ENST00000472420 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
LRPPRC-208ENST00000472420 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
LRPPRC-208ENST00000472420 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
LRPPRC-208ENST00000472420 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
LRPPRC-208ENST00000472420 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
LRPPRC-208ENST00000472420 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
LRPPRC-208ENST00000472420 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
LRPPRC-208ENST00000472420 NESP48681 1621 aa15.98■□□□□ 0.15
LRPPRC-208ENST00000472420 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
LRPPRC-208ENST00000472420 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
LRPPRC-208ENST00000472420 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
LRPPRC-208ENST00000472420 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
LRPPRC-208ENST00000472420 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
LRPPRC-208ENST00000472420 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
LRPPRC-208ENST00000472420 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
LRPPRC-208ENST00000472420 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
LRPPRC-208ENST00000472420 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
LRPPRC-208ENST00000472420 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
LRPPRC-208ENST00000472420 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
LRPPRC-208ENST00000472420 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
LRPPRC-208ENST00000472420 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
LRPPRC-208ENST00000472420 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
LRPPRC-208ENST00000472420 FOXD1Q16676 465 aa15.71■□□□□ 0.11
LRPPRC-208ENST00000472420 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
LRPPRC-208ENST00000472420 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
LRPPRC-208ENST00000472420 ARHGEF11O15085 1522 aa15.66■□□□□ 0.1
LRPPRC-208ENST00000472420 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
LRPPRC-208ENST00000472420 WDR62O43379 1518 aa15.61■□□□□ 0.09
LRPPRC-208ENST00000472420 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
LRPPRC-208ENST00000472420 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
LRPPRC-208ENST00000472420 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
LRPPRC-208ENST00000472420 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
LRPPRC-208ENST00000472420 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
LRPPRC-208ENST00000472420 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
LRPPRC-208ENST00000472420 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
LRPPRC-208ENST00000472420 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
LRPPRC-208ENST00000472420 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
LRPPRC-208ENST00000472420 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
LRPPRC-208ENST00000472420 URB2Q14146 1524 aaKnown RBP15.12■□□□□ 0.01
LRPPRC-208ENST00000472420 CHD1O14646 1710 aa15.12■□□□□ 0.01
LRPPRC-208ENST00000472420 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
LRPPRC-208ENST00000472420 IFT140Q96RY7 1462 aa15.04■□□□□ -0
LRPPRC-208ENST00000472420 ADRA2BP18089 450 aa15.01□□□□□ -0.01
LRPPRC-208ENST00000472420 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
LRPPRC-208ENST00000472420 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
LRPPRC-208ENST00000472420 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
LRPPRC-208ENST00000472420 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
LRPPRC-208ENST00000472420 FBLN2P98095 1184 aa14.92□□□□□ -0.02
LRPPRC-208ENST00000472420 FBXO41Q8TF61 875 aa14.92□□□□□ -0.02
LRPPRC-208ENST00000472420 CFTRP13569 1480 aa14.92□□□□□ -0.02
LRPPRC-208ENST00000472420 CLASP1Q7Z460 1538 aa14.91□□□□□ -0.02
LRPPRC-208ENST00000472420 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
LRPPRC-208ENST00000472420 LMTK3Q96Q04 1460 aa14.89□□□□□ -0.03
LRPPRC-208ENST00000472420 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
LRPPRC-208ENST00000472420 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.03
LRPPRC-208ENST00000472420 KIF13AQ9H1H9 1805 aa14.83□□□□□ -0.04
LRPPRC-208ENST00000472420 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
LRPPRC-208ENST00000472420 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.042e-11■■■■□ 24.1
LRPPRC-208ENST00000472420 SOCS7O14512 581 aa14.81□□□□□ -0.04
LRPPRC-208ENST00000472420 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
LRPPRC-208ENST00000472420 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
LRPPRC-208ENST00000472420 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
LRPPRC-208ENST00000472420 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
LRPPRC-208ENST00000472420 MSH5O43196 834 aa14.7□□□□□ -0.06
LRPPRC-208ENST00000472420 KDM6BO15054 1643 aa14.68□□□□□ -0.06
LRPPRC-208ENST00000472420 ILDR2Q71H61 639 aa14.67□□□□□ -0.06
LRPPRC-208ENST00000472420 WIZO95785 1651 aa14.67□□□□□ -0.06
LRPPRC-208ENST00000472420 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LRPPRC-208ENST00000472420 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
LRPPRC-208ENST00000472420 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
LRPPRC-208ENST00000472420 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
LRPPRC-208ENST00000472420 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
LRPPRC-208ENST00000472420 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
LRPPRC-208ENST00000472420 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
LRPPRC-208ENST00000472420 FAM69CQ0P6D2 419 aa14.56□□□□□ -0.08
LRPPRC-208ENST00000472420 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
LRPPRC-208ENST00000472420 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
LRPPRC-208ENST00000472420 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
LRPPRC-208ENST00000472420 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
LRPPRC-208ENST00000472420 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
LRPPRC-208ENST00000472420 DIP2BQ9P265 1576 aa14.5□□□□□ -0.09
LRPPRC-208ENST00000472420 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms