RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 NISCHQ9Y2I1 1504 aa40.46■■■■■ 4.07
TSPO-205ENST00000472378 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
TSPO-205ENST00000472378 ABCC9O60706 1549 aa35.13■■■■□ 3.21
TSPO-205ENST00000472378 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
TSPO-205ENST00000472378 NACADO15069 1562 aa33.89■■■■□ 3.02
TSPO-205ENST00000472378 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
TSPO-205ENST00000472378 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
TSPO-205ENST00000472378 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
TSPO-205ENST00000472378 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
TSPO-205ENST00000472378 UNC13AQ9UPW8 1703 aa33.01■■■□□ 2.87
TSPO-205ENST00000472378 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
TSPO-205ENST00000472378 SCRIBQ14160 1630 aa32.77■■■□□ 2.84
TSPO-205ENST00000472378 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
TSPO-205ENST00000472378 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
TSPO-205ENST00000472378 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
TSPO-205ENST00000472378 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
TSPO-205ENST00000472378 CC2D2AQ9P2K1 1620 aa31.8■■■□□ 2.68
TSPO-205ENST00000472378 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
TSPO-205ENST00000472378 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
TSPO-205ENST00000472378 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
TSPO-205ENST00000472378 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
TSPO-205ENST00000472378 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
TSPO-205ENST00000472378 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
TSPO-205ENST00000472378 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
TSPO-205ENST00000472378 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
TSPO-205ENST00000472378 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
TSPO-205ENST00000472378 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.55
TSPO-205ENST00000472378 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
TSPO-205ENST00000472378 WIZO95785 1651 aa30.78■■■□□ 2.52
TSPO-205ENST00000472378 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
TSPO-205ENST00000472378 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
TSPO-205ENST00000472378 ERCC6Q03468 1493 aa30.39■■■□□ 2.46
TSPO-205ENST00000472378 NESP48681 1621 aa30.36■■■□□ 2.45
TSPO-205ENST00000472378 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
TSPO-205ENST00000472378 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
TSPO-205ENST00000472378 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
TSPO-205ENST00000472378 CFTRP13569 1480 aa30.13■■■□□ 2.41
TSPO-205ENST00000472378 CUX2O14529 1486 aa30.07■■■□□ 2.4
TSPO-205ENST00000472378 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
TSPO-205ENST00000472378 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
TSPO-205ENST00000472378 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
TSPO-205ENST00000472378 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
TSPO-205ENST00000472378 THOC2Q8NI27 1593 aaKnown RBP29.93■■■□□ 2.38
TSPO-205ENST00000472378 PRDM2Q13029 1718 aa29.92■■■□□ 2.38
TSPO-205ENST00000472378 MRC2Q9UBG0 1479 aa29.89■■■□□ 2.38
TSPO-205ENST00000472378 WDR62O43379 1518 aa29.76■■■□□ 2.36
TSPO-205ENST00000472378 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
TSPO-205ENST00000472378 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
TSPO-205ENST00000472378 TOPBP1Q92547 1522 aa29.46■■■□□ 2.31
TSPO-205ENST00000472378 DNMBPQ6XZF7 1577 aa29.46■■■□□ 2.31
TSPO-205ENST00000472378 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
TSPO-205ENST00000472378 CUX1P39880 1505 aa29.2■■■□□ 2.27
TSPO-205ENST00000472378 POLA1P09884 1462 aaPredicted RBP29.2■■■□□ 2.26
TSPO-205ENST00000472378 SOGA1O94964 1423 aa29.14■■■□□ 2.26
TSPO-205ENST00000472378 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.26
TSPO-205ENST00000472378 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
TSPO-205ENST00000472378 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
TSPO-205ENST00000472378 DNAJC5Q9H3Z4 198 aa29.1■■■□□ 2.25
TSPO-205ENST00000472378 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
TSPO-205ENST00000472378 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
TSPO-205ENST00000472378 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
TSPO-205ENST00000472378 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
TSPO-205ENST00000472378 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
TSPO-205ENST00000472378 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
TSPO-205ENST00000472378 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.22
TSPO-205ENST00000472378 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
TSPO-205ENST00000472378 TDRD9Q8NDG6 1382 aaKnown RBP28.92■■■□□ 2.22
TSPO-205ENST00000472378 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
TSPO-205ENST00000472378 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
TSPO-205ENST00000472378 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
TSPO-205ENST00000472378 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
TSPO-205ENST00000472378 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
TSPO-205ENST00000472378 ABCA5Q8WWZ7 1642 aa28.73■■■□□ 2.19
TSPO-205ENST00000472378 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
TSPO-205ENST00000472378 FBLN2P98095 1184 aa28.69■■■□□ 2.18
TSPO-205ENST00000472378 PBRM1Q86U86 1689 aa28.69■■■□□ 2.18
TSPO-205ENST00000472378 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
TSPO-205ENST00000472378 CHD1O14646 1710 aa28.63■■■□□ 2.17
TSPO-205ENST00000472378 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
TSPO-205ENST00000472378 ERICH3Q5RHP9 1530 aa28.59■■■□□ 2.17
TSPO-205ENST00000472378 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
TSPO-205ENST00000472378 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
TSPO-205ENST00000472378 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
TSPO-205ENST00000472378 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
TSPO-205ENST00000472378 GRIN2AQ12879 1464 aa28.41■■■□□ 2.14
TSPO-205ENST00000472378 IGF1RP08069 1367 aa28.35■■■□□ 2.13
TSPO-205ENST00000472378 CUL7Q14999 1698 aa28.34■■■□□ 2.13
TSPO-205ENST00000472378 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
TSPO-205ENST00000472378 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
TSPO-205ENST00000472378 NUP160Q12769 1436 aa28.27■■■□□ 2.12
TSPO-205ENST00000472378 RIMBP3CA6NJZ7 1639 aa28.26■■■□□ 2.11
TSPO-205ENST00000472378 RIMBP3BA6NNM3 1639 aa28.26■■■□□ 2.11
TSPO-205ENST00000472378 RIMBP3Q9UFD9 1639 aa28.26■■■□□ 2.11
TSPO-205ENST00000472378 CARMIL1Q5VZK9 1371 aa28.23■■■□□ 2.11
TSPO-205ENST00000472378 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
TSPO-205ENST00000472378 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
TSPO-205ENST00000472378 RAPGEF2Q9Y4G8 1499 aa28.07■■■□□ 2.08
TSPO-205ENST00000472378 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
TSPO-205ENST00000472378 EEA1Q15075 1411 aa28.06■■■□□ 2.08
TSPO-205ENST00000472378 KIAA0586Q9BVV6 1533 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms