RNA–Protein interactions for RNA: ENST00000471332.1

CHL1-212, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 5

Gene CHL1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-212ENST00000471332 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
CHL1-212ENST00000471332 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
CHL1-212ENST00000471332 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
CHL1-212ENST00000471332 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CHL1-212ENST00000471332 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
CHL1-212ENST00000471332 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
CHL1-212ENST00000471332 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
CHL1-212ENST00000471332 NACADO15069 1562 aa13.37□□□□□ -0.27
CHL1-212ENST00000471332 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.28
CHL1-212ENST00000471332 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
CHL1-212ENST00000471332 ABCC9O60706 1549 aa13.33□□□□□ -0.28
CHL1-212ENST00000471332 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
CHL1-212ENST00000471332 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
CHL1-212ENST00000471332 SENP3Q9H4L4 574 aaPredicted RBP13.16□□□□□ -0.3
CHL1-212ENST00000471332 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
CHL1-212ENST00000471332 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
CHL1-212ENST00000471332 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
CHL1-212ENST00000471332 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CHL1-212ENST00000471332 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
CHL1-212ENST00000471332 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
CHL1-212ENST00000471332 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
CHL1-212ENST00000471332 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
CHL1-212ENST00000471332 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
CHL1-212ENST00000471332 WIZO95785 1651 aa12.57□□□□□ -0.4
CHL1-212ENST00000471332 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
CHL1-212ENST00000471332 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
CHL1-212ENST00000471332 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHL1-212ENST00000471332 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
CHL1-212ENST00000471332 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
CHL1-212ENST00000471332 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
CHL1-212ENST00000471332 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
CHL1-212ENST00000471332 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
CHL1-212ENST00000471332 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
CHL1-212ENST00000471332 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
CHL1-212ENST00000471332 FOXD1Q16676 465 aa12.22□□□□□ -0.45
CHL1-212ENST00000471332 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
CHL1-212ENST00000471332 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
CHL1-212ENST00000471332 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
CHL1-212ENST00000471332 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
CHL1-212ENST00000471332 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
CHL1-212ENST00000471332 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
CHL1-212ENST00000471332 EEA1Q15075 1411 aa12.05□□□□□ -0.48
CHL1-212ENST00000471332 CFTRP13569 1480 aa12.05□□□□□ -0.48
CHL1-212ENST00000471332 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
CHL1-212ENST00000471332 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
CHL1-212ENST00000471332 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
CHL1-212ENST00000471332 CADPSQ9ULU8 1353 aa11.94□□□□□ -0.5
CHL1-212ENST00000471332 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
CHL1-212ENST00000471332 CUX1P39880 1505 aa11.87□□□□□ -0.51
CHL1-212ENST00000471332 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
CHL1-212ENST00000471332 KIF21BO75037 1637 aa11.86□□□□□ -0.51
CHL1-212ENST00000471332 SOGA1O94964 1423 aa11.86□□□□□ -0.51
CHL1-212ENST00000471332 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
CHL1-212ENST00000471332 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
CHL1-212ENST00000471332 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
CHL1-212ENST00000471332 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CHL1-212ENST00000471332 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
CHL1-212ENST00000471332 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
CHL1-212ENST00000471332 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
CHL1-212ENST00000471332 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.52
CHL1-212ENST00000471332 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
CHL1-212ENST00000471332 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
CHL1-212ENST00000471332 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
CHL1-212ENST00000471332 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
CHL1-212ENST00000471332 NESP48681 1621 aa11.72□□□□□ -0.53
CHL1-212ENST00000471332 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
CHL1-212ENST00000471332 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
CHL1-212ENST00000471332 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
CHL1-212ENST00000471332 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
CHL1-212ENST00000471332 CUX2O14529 1486 aa11.67□□□□□ -0.54
CHL1-212ENST00000471332 KIF21AQ7Z4S6 1674 aa11.66□□□□□ -0.54
CHL1-212ENST00000471332 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
CHL1-212ENST00000471332 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
CHL1-212ENST00000471332 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
CHL1-212ENST00000471332 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
CHL1-212ENST00000471332 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
CHL1-212ENST00000471332 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CHL1-212ENST00000471332 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
CHL1-212ENST00000471332 ADRA2BP18089 450 aa11.62□□□□□ -0.55
CHL1-212ENST00000471332 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
CHL1-212ENST00000471332 CLIP1P30622 1438 aa11.6□□□□□ -0.55
CHL1-212ENST00000471332 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
CHL1-212ENST00000471332 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
CHL1-212ENST00000471332 IGF1RP08069 1367 aa11.57□□□□□ -0.56
CHL1-212ENST00000471332 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
CHL1-212ENST00000471332 WDR62O43379 1518 aa11.56□□□□□ -0.56
CHL1-212ENST00000471332 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
CHL1-212ENST00000471332 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
CHL1-212ENST00000471332 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
CHL1-212ENST00000471332 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
CHL1-212ENST00000471332 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
CHL1-212ENST00000471332 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
CHL1-212ENST00000471332 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
CHL1-212ENST00000471332 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
CHL1-212ENST00000471332 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
CHL1-212ENST00000471332 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
CHL1-212ENST00000471332 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
CHL1-212ENST00000471332 EFCAB5A4FU69 1503 aa11.47□□□□□ -0.57
CHL1-212ENST00000471332 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
CHL1-212ENST00000471332 PBRM1Q86U86 1689 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms