RNA–Protein interactions for RNA: ENST00000470586.5

PRDM15-210, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 2,283 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-210ENST00000470586 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
PRDM15-210ENST00000470586 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
PRDM15-210ENST00000470586 ABCC9O60706 1549 aa27.65■■■□□ 2.02
PRDM15-210ENST00000470586 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
PRDM15-210ENST00000470586 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
PRDM15-210ENST00000470586 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
PRDM15-210ENST00000470586 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
PRDM15-210ENST00000470586 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
PRDM15-210ENST00000470586 NACADO15069 1562 aa26.88■■□□□ 1.89
PRDM15-210ENST00000470586 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
PRDM15-210ENST00000470586 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
PRDM15-210ENST00000470586 UNC13AQ9UPW8 1703 aa26.18■■□□□ 1.78
PRDM15-210ENST00000470586 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
PRDM15-210ENST00000470586 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
PRDM15-210ENST00000470586 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
PRDM15-210ENST00000470586 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
PRDM15-210ENST00000470586 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
PRDM15-210ENST00000470586 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
PRDM15-210ENST00000470586 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
PRDM15-210ENST00000470586 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
PRDM15-210ENST00000470586 WIZO95785 1651 aa25.28■■□□□ 1.64
PRDM15-210ENST00000470586 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.63
PRDM15-210ENST00000470586 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
PRDM15-210ENST00000470586 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
PRDM15-210ENST00000470586 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
PRDM15-210ENST00000470586 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
PRDM15-210ENST00000470586 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
PRDM15-210ENST00000470586 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
PRDM15-210ENST00000470586 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
PRDM15-210ENST00000470586 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
PRDM15-210ENST00000470586 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
PRDM15-210ENST00000470586 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PRDM15-210ENST00000470586 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
PRDM15-210ENST00000470586 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
PRDM15-210ENST00000470586 NESP48681 1621 aa24.22■■□□□ 1.47
PRDM15-210ENST00000470586 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
PRDM15-210ENST00000470586 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
PRDM15-210ENST00000470586 CFTRP13569 1480 aa24.18■■□□□ 1.46
PRDM15-210ENST00000470586 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
PRDM15-210ENST00000470586 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
PRDM15-210ENST00000470586 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
PRDM15-210ENST00000470586 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
PRDM15-210ENST00000470586 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
PRDM15-210ENST00000470586 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
PRDM15-210ENST00000470586 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
PRDM15-210ENST00000470586 CUX1P39880 1505 aa23.83■■□□□ 1.41
PRDM15-210ENST00000470586 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
PRDM15-210ENST00000470586 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
PRDM15-210ENST00000470586 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
PRDM15-210ENST00000470586 SOGA1O94964 1423 aa23.75■■□□□ 1.39
PRDM15-210ENST00000470586 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
PRDM15-210ENST00000470586 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
PRDM15-210ENST00000470586 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
PRDM15-210ENST00000470586 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
PRDM15-210ENST00000470586 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
PRDM15-210ENST00000470586 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
PRDM15-210ENST00000470586 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
PRDM15-210ENST00000470586 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
PRDM15-210ENST00000470586 DNMBPQ6XZF7 1577 aa23.58■■□□□ 1.37
PRDM15-210ENST00000470586 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
PRDM15-210ENST00000470586 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PRDM15-210ENST00000470586 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
PRDM15-210ENST00000470586 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
PRDM15-210ENST00000470586 WDR62O43379 1518 aa23.49■■□□□ 1.35
PRDM15-210ENST00000470586 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
PRDM15-210ENST00000470586 CUX2O14529 1486 aa23.44■■□□□ 1.34
PRDM15-210ENST00000470586 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
PRDM15-210ENST00000470586 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
PRDM15-210ENST00000470586 EEA1Q15075 1411 aa23.33■■□□□ 1.32
PRDM15-210ENST00000470586 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
PRDM15-210ENST00000470586 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
PRDM15-210ENST00000470586 IGF1RP08069 1367 aa23.26■■□□□ 1.31
PRDM15-210ENST00000470586 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.31
PRDM15-210ENST00000470586 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
PRDM15-210ENST00000470586 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
PRDM15-210ENST00000470586 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
PRDM15-210ENST00000470586 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
PRDM15-210ENST00000470586 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
PRDM15-210ENST00000470586 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
PRDM15-210ENST00000470586 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
PRDM15-210ENST00000470586 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
PRDM15-210ENST00000470586 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
PRDM15-210ENST00000470586 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
PRDM15-210ENST00000470586 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
PRDM15-210ENST00000470586 KIF21BO75037 1637 aa23.09■■□□□ 1.29
PRDM15-210ENST00000470586 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
PRDM15-210ENST00000470586 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
PRDM15-210ENST00000470586 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
PRDM15-210ENST00000470586 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
PRDM15-210ENST00000470586 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
PRDM15-210ENST00000470586 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
PRDM15-210ENST00000470586 FBLN2P98095 1184 aa22.95■■□□□ 1.26
PRDM15-210ENST00000470586 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
PRDM15-210ENST00000470586 CUL7Q14999 1698 aa22.9■■□□□ 1.26
PRDM15-210ENST00000470586 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
PRDM15-210ENST00000470586 ADAMTS12P58397 1594 aa22.85■■□□□ 1.25
PRDM15-210ENST00000470586 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
PRDM15-210ENST00000470586 CLIP1P30622 1438 aa22.83■■□□□ 1.24
PRDM15-210ENST00000470586 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
PRDM15-210ENST00000470586 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms