RNA–Protein interactions for RNA: ENST00000470452.5

COPS8-207, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 1 (best)

Gene COPS8, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-207ENST00000470452 NISCHQ9Y2I1 1504 aa51.84■■■■■ 5.89
COPS8-207ENST00000470452 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
COPS8-207ENST00000470452 ABCC9O60706 1549 aa44.4■■■■■ 4.7
COPS8-207ENST00000470452 ZCCHC6Q5VYS8 1495 aaKnown RBP43.3■■■■■ 4.52
COPS8-207ENST00000470452 DCAF8L2P0C7V8 631 aa43.23■■■■■ 4.51
COPS8-207ENST00000470452 NACADO15069 1562 aa42.99■■■■■ 4.47
COPS8-207ENST00000470452 RB1CC1Q8TDY2 1594 aa42.93■■■■■ 4.46
COPS8-207ENST00000470452 DCAF1Q9Y4B6 1507 aa42.9■■■■■ 4.46
COPS8-207ENST00000470452 MYO15BQ96JP2 1530 aa42.87■■■■■ 4.45
COPS8-207ENST00000470452 SCRIBQ14160 1630 aa41.92■■■■■ 4.3
COPS8-207ENST00000470452 UNC13AQ9UPW8 1703 aa41.9■■■■■ 4.3
COPS8-207ENST00000470452 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
COPS8-207ENST00000470452 BICRAQ9NZM4 1560 aa41.55■■■■■ 4.24
COPS8-207ENST00000470452 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
COPS8-207ENST00000470452 EIF4G1Q04637 1599 aaKnown RBP40.45■■■■■ 4.07
COPS8-207ENST00000470452 CECR2Q9BXF3 1484 aa40.33■■■■■ 4.05
COPS8-207ENST00000470452 DNAJC5BQ9UF47 199 aa40.21■■■■■ 4.03
COPS8-207ENST00000470452 BAZ1AQ9NRL2 1556 aaPredicted RBP40.17■■■■■ 4.02
COPS8-207ENST00000470452 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
COPS8-207ENST00000470452 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
COPS8-207ENST00000470452 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
COPS8-207ENST00000470452 SMARCA2P51531 1590 aa39.76■■■■□ 3.96
COPS8-207ENST00000470452 ATAD2BQ9ULI0 1458 aa39.76■■■■□ 3.96
COPS8-207ENST00000470452 RSF1Q96T23 1441 aaPredicted RBP39.71■■■■□ 3.95
COPS8-207ENST00000470452 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
COPS8-207ENST00000470452 NCAPD3P42695 1498 aa39.65■■■■□ 3.94
COPS8-207ENST00000470452 WIZO95785 1651 aa39.57■■■■□ 3.93
COPS8-207ENST00000470452 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
COPS8-207ENST00000470452 BAZ1BQ9UIG0 1483 aaKnown RBP39.5■■■■□ 3.91
COPS8-207ENST00000470452 SUPT5HO00267 1087 aaKnown RBP39.21■■■■□ 3.87
COPS8-207ENST00000470452 TOP2AP11388 1531 aaKnown RBP39.19■■■■□ 3.86
COPS8-207ENST00000470452 CCDC88BA6NC98 1476 aa38.73■■■■□ 3.79
COPS8-207ENST00000470452 NESP48681 1621 aa38.56■■■■□ 3.76
COPS8-207ENST00000470452 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
COPS8-207ENST00000470452 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
COPS8-207ENST00000470452 CFTRP13569 1480 aa38.41■■■■□ 3.74
COPS8-207ENST00000470452 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
COPS8-207ENST00000470452 ERCC6Q03468 1493 aa38.26■■■■□ 3.72
COPS8-207ENST00000470452 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
COPS8-207ENST00000470452 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
COPS8-207ENST00000470452 KIF21AQ7Z4S6 1674 aa38.11■■■■□ 3.69
COPS8-207ENST00000470452 CEP164Q9UPV0 1460 aa38.03■■■■□ 3.68
COPS8-207ENST00000470452 MRC2Q9UBG0 1479 aa37.85■■■■□ 3.65
COPS8-207ENST00000470452 THOC2Q8NI27 1593 aaKnown RBP37.83■■■■□ 3.65
COPS8-207ENST00000470452 WDR62O43379 1518 aa37.68■■■■□ 3.62
COPS8-207ENST00000470452 URB2Q14146 1524 aaKnown RBP37.68■■■■□ 3.62
COPS8-207ENST00000470452 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
COPS8-207ENST00000470452 CUX2O14529 1486 aa37.6■■■■□ 3.61
COPS8-207ENST00000470452 DNMBPQ6XZF7 1577 aa37.56■■■■□ 3.6
COPS8-207ENST00000470452 TOPBP1Q92547 1522 aa37.56■■■■□ 3.6
COPS8-207ENST00000470452 CUX1P39880 1505 aa37.46■■■■□ 3.59
COPS8-207ENST00000470452 WRNQ14191 1432 aaPredicted RBP eCLIP37.46■■■■□ 3.59
COPS8-207ENST00000470452 SYNJ1O43426 1573 aa37.31■■■■□ 3.56
COPS8-207ENST00000470452 TOP2BQ02880 1626 aa37.28■■■■□ 3.56
COPS8-207ENST00000470452 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
COPS8-207ENST00000470452 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
COPS8-207ENST00000470452 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
COPS8-207ENST00000470452 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
COPS8-207ENST00000470452 SOGA1O94964 1423 aa37.17■■■■□ 3.54
COPS8-207ENST00000470452 RAD54L2Q9Y4B4 1467 aa37.12■■■■□ 3.53
COPS8-207ENST00000470452 TARBP1Q13395 1621 aaKnown RBP37.08■■■■□ 3.53
COPS8-207ENST00000470452 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
COPS8-207ENST00000470452 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
COPS8-207ENST00000470452 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
COPS8-207ENST00000470452 WDR97A6NE52 1622 aa36.89■■■■□ 3.5
COPS8-207ENST00000470452 TDRD9Q8NDG6 1382 aaKnown RBP36.89■■■■□ 3.5
COPS8-207ENST00000470452 CHIC1Q5VXU3 224 aa36.86■■■■□ 3.49
COPS8-207ENST00000470452 AQRO60306 1485 aaKnown RBP eCLIP36.85■■■■□ 3.49
COPS8-207ENST00000470452 EIF4G3O43432 1585 aaKnown RBP36.85■■■■□ 3.49
COPS8-207ENST00000470452 GAPVD1Q14C86 1478 aa36.74■■■■□ 3.47
COPS8-207ENST00000470452 ABCA5Q8WWZ7 1642 aa36.71■■■■□ 3.47
COPS8-207ENST00000470452 GRIN2BQ13224 1484 aa36.65■■■■□ 3.46
COPS8-207ENST00000470452 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
COPS8-207ENST00000470452 PBRM1Q86U86 1689 aa36.6■■■■□ 3.45
COPS8-207ENST00000470452 SNAPC4Q5SXM2 1469 aa36.53■■■■□ 3.44
COPS8-207ENST00000470452 ERICH3Q5RHP9 1530 aa36.49■■■■□ 3.43
COPS8-207ENST00000470452 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
COPS8-207ENST00000470452 RUSC2Q8N2Y8 1516 aa36.44■■■■□ 3.42
COPS8-207ENST00000470452 IGF1RP08069 1367 aa36.4■■■■□ 3.42
COPS8-207ENST00000470452 FBLN2P98095 1184 aa36.38■■■■□ 3.41
COPS8-207ENST00000470452 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
COPS8-207ENST00000470452 CHMP7Q8WUX9 453 aaPredicted RBP36.34■■■■□ 3.41
COPS8-207ENST00000470452 ADAMTS12P58397 1594 aa36.34■■■■□ 3.41
COPS8-207ENST00000470452 FHAD1B1AJZ9 1412 aa36.33■■■■□ 3.41
COPS8-207ENST00000470452 EEA1Q15075 1411 aa36.3■■■■□ 3.4
COPS8-207ENST00000470452 CHD1O14646 1710 aa36.28■■■■□ 3.4
COPS8-207ENST00000470452 CUL7Q14999 1698 aa36.28■■■■□ 3.4
COPS8-207ENST00000470452 FAM9AQ8IZU1 332 aaPredicted RBP36.25■■■■□ 3.39
COPS8-207ENST00000470452 CARMIL1Q5VZK9 1371 aa36.23■■■■□ 3.39
COPS8-207ENST00000470452 CSRNP3Q8WYN3 585 aa36.2■■■■□ 3.39
COPS8-207ENST00000470452 OSCARQ8IYS5 282 aa36.19■■■■□ 3.38
COPS8-207ENST00000470452 GRIN2AQ12879 1464 aa36.18■■■■□ 3.38
COPS8-207ENST00000470452 RAPGEF2Q9Y4G8 1499 aa36.06■■■■□ 3.36
COPS8-207ENST00000470452 PRXQ9BXM0 1461 aa36.04■■■■□ 3.36
COPS8-207ENST00000470452 NUP160Q12769 1436 aa35.97■■■■□ 3.35
COPS8-207ENST00000470452 CEP170Q5SW79 1584 aa35.96■■■■□ 3.35
COPS8-207ENST00000470452 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
COPS8-207ENST00000470452 KIF21BO75037 1637 aa35.86■■■■□ 3.33
COPS8-207ENST00000470452 DNAJC5Q9H3Z4 198 aa35.82■■■■□ 3.32
COPS8-207ENST00000470452 KIAA0586Q9BVV6 1533 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms