RNA–Protein interactions for RNA: ENST00000470257.1

TTN-213, Transcript of titin, humanhuman

TSL 1 (best)

Gene TTN, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTN-213ENST00000470257 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
TTN-213ENST00000470257 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
TTN-213ENST00000470257 ABCC9O60706 1549 aa20.34■□□□□ 0.85
TTN-213ENST00000470257 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
TTN-213ENST00000470257 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
TTN-213ENST00000470257 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
TTN-213ENST00000470257 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
TTN-213ENST00000470257 NACADO15069 1562 aa19.84■□□□□ 0.77
TTN-213ENST00000470257 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
TTN-213ENST00000470257 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
TTN-213ENST00000470257 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
TTN-213ENST00000470257 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
TTN-213ENST00000470257 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
TTN-213ENST00000470257 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
TTN-213ENST00000470257 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
TTN-213ENST00000470257 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
TTN-213ENST00000470257 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
TTN-213ENST00000470257 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
TTN-213ENST00000470257 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
TTN-213ENST00000470257 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
TTN-213ENST00000470257 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
TTN-213ENST00000470257 WIZO95785 1651 aa18.54■□□□□ 0.56
TTN-213ENST00000470257 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
TTN-213ENST00000470257 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
TTN-213ENST00000470257 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
TTN-213ENST00000470257 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
TTN-213ENST00000470257 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
TTN-213ENST00000470257 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
TTN-213ENST00000470257 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
TTN-213ENST00000470257 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
TTN-213ENST00000470257 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
TTN-213ENST00000470257 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
TTN-213ENST00000470257 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
TTN-213ENST00000470257 HRCP23327 699 aa18.09■□□□□ 0.49
TTN-213ENST00000470257 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
TTN-213ENST00000470257 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
TTN-213ENST00000470257 CFTRP13569 1480 aa17.85■□□□□ 0.45
TTN-213ENST00000470257 LOC105371045A0A1W2PR82 267 aa17.84■□□□□ 0.45
TTN-213ENST00000470257 NESP48681 1621 aa17.78■□□□□ 0.44
TTN-213ENST00000470257 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
TTN-213ENST00000470257 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
TTN-213ENST00000470257 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
TTN-213ENST00000470257 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
TTN-213ENST00000470257 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.42
TTN-213ENST00000470257 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
TTN-213ENST00000470257 PPARGC1BQ86YN6 1023 aaKnown RBP17.62■□□□□ 0.41
TTN-213ENST00000470257 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
TTN-213ENST00000470257 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
TTN-213ENST00000470257 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
TTN-213ENST00000470257 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
TTN-213ENST00000470257 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
TTN-213ENST00000470257 CUX1P39880 1505 aa17.51■□□□□ 0.39
TTN-213ENST00000470257 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
TTN-213ENST00000470257 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
TTN-213ENST00000470257 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.38
TTN-213ENST00000470257 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
TTN-213ENST00000470257 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
TTN-213ENST00000470257 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
TTN-213ENST00000470257 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
TTN-213ENST00000470257 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
TTN-213ENST00000470257 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
TTN-213ENST00000470257 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
TTN-213ENST00000470257 SOGA1O94964 1423 aa17.33■□□□□ 0.36
TTN-213ENST00000470257 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
TTN-213ENST00000470257 WDR62O43379 1518 aa17.31■□□□□ 0.36
TTN-213ENST00000470257 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
TTN-213ENST00000470257 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
TTN-213ENST00000470257 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
TTN-213ENST00000470257 EEA1Q15075 1411 aa17.22■□□□□ 0.35
TTN-213ENST00000470257 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
TTN-213ENST00000470257 CUX2O14529 1486 aa17.21■□□□□ 0.35
TTN-213ENST00000470257 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
TTN-213ENST00000470257 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
TTN-213ENST00000470257 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
TTN-213ENST00000470257 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
TTN-213ENST00000470257 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
TTN-213ENST00000470257 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
TTN-213ENST00000470257 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
TTN-213ENST00000470257 IGF1RP08069 1367 aa17.09■□□□□ 0.33
TTN-213ENST00000470257 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
TTN-213ENST00000470257 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
TTN-213ENST00000470257 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
TTN-213ENST00000470257 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
TTN-213ENST00000470257 PRXQ9BXM0 1461 aa17.02■□□□□ 0.31
TTN-213ENST00000470257 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
TTN-213ENST00000470257 KIF21BO75037 1637 aa16.99■□□□□ 0.31
TTN-213ENST00000470257 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
TTN-213ENST00000470257 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
TTN-213ENST00000470257 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
TTN-213ENST00000470257 GOLGA3Q08378 1498 aa16.97■□□□□ 0.31
TTN-213ENST00000470257 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
TTN-213ENST00000470257 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
TTN-213ENST00000470257 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
TTN-213ENST00000470257 CUL7Q14999 1698 aa16.93■□□□□ 0.3
TTN-213ENST00000470257 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
TTN-213ENST00000470257 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
TTN-213ENST00000470257 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
TTN-213ENST00000470257 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
TTN-213ENST00000470257 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
TTN-213ENST00000470257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms