RNA–Protein interactions for RNA: ENST00000470202.1

USP41-203, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 5

Gene USP41, Length 182 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-203ENST00000470202 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
USP41-203ENST00000470202 ABCC9O60706 1549 aa10.91□□□□□ -0.66
USP41-203ENST00000470202 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
USP41-203ENST00000470202 NISCHQ9Y2I1 1504 aa10.73□□□□□ -0.69
USP41-203ENST00000470202 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
USP41-203ENST00000470202 RB1CC1Q8TDY2 1594 aa10.01□□□□□ -0.81
USP41-203ENST00000470202 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP41-203ENST00000470202 CECR2Q9BXF3 1484 aa9.95□□□□□ -0.82
USP41-203ENST00000470202 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
USP41-203ENST00000470202 CUX2O14529 1486 aa9.83□□□□□ -0.84
USP41-203ENST00000470202 CC2D2AQ9P2K1 1620 aa9.82□□□□□ -0.84
USP41-203ENST00000470202 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
USP41-203ENST00000470202 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
USP41-203ENST00000470202 NACADO15069 1562 aa9.71□□□□□ -0.85
USP41-203ENST00000470202 EIF4G1Q04637 1599 aaKnown RBP9.6□□□□□ -0.87
USP41-203ENST00000470202 SHROOM4Q9ULL8 1493 aa9.59□□□□□ -0.87
USP41-203ENST00000470202 AEBP2Q6ZN18 517 aaPredicted RBP9.58□□□□□ -0.88
USP41-203ENST00000470202 ERCC6Q03468 1493 aa9.5□□□□□ -0.89
USP41-203ENST00000470202 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
USP41-203ENST00000470202 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
USP41-203ENST00000470202 DCAF8L2P0C7V8 631 aa9.3□□□□□ -0.92
USP41-203ENST00000470202 THOC2Q8NI27 1593 aaKnown RBP9.27□□□□□ -0.93
USP41-203ENST00000470202 BAZ1AQ9NRL2 1556 aaPredicted RBP9.19□□□□□ -0.94
USP41-203ENST00000470202 RIMBP3CA6NJZ7 1639 aa9.19□□□□□ -0.94
USP41-203ENST00000470202 RIMBP3BA6NNM3 1639 aa9.19□□□□□ -0.94
USP41-203ENST00000470202 RIMBP3Q9UFD9 1639 aa9.19□□□□□ -0.94
USP41-203ENST00000470202 TRHP20396 242 aaPredicted RBP9.16□□□□□ -0.94
USP41-203ENST00000470202 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
USP41-203ENST00000470202 SCRIBQ14160 1630 aa9.12□□□□□ -0.95
USP41-203ENST00000470202 NESP48681 1621 aa9.1□□□□□ -0.95
USP41-203ENST00000470202 SMARCA2P51531 1590 aa9.08□□□□□ -0.96
USP41-203ENST00000470202 ARHGEF11O15085 1522 aa9.07□□□□□ -0.96
USP41-203ENST00000470202 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
USP41-203ENST00000470202 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
USP41-203ENST00000470202 CYB5RLQ6IPT4 315 aa8.96□□□□□ -0.98
USP41-203ENST00000470202 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
USP41-203ENST00000470202 WDR62O43379 1518 aa8.92□□□□□ -0.98
USP41-203ENST00000470202 ARAP1Q96P48 1450 aa8.92□□□□□ -0.98
USP41-203ENST00000470202 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.98
USP41-203ENST00000470202 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
USP41-203ENST00000470202 PDS5BQ9NTI5 1447 aa8.88□□□□□ -0.99
USP41-203ENST00000470202 SOCS7O14512 581 aa8.86□□□□□ -0.99
USP41-203ENST00000470202 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
USP41-203ENST00000470202 DCAF1Q9Y4B6 1507 aa8.84□□□□□ -0.99
USP41-203ENST00000470202 ERCC6L2Q5T890 1561 aa8.82□□□□□ -1
USP41-203ENST00000470202 FBXO41Q8TF61 875 aa8.81□□□□□ -1
USP41-203ENST00000470202 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
USP41-203ENST00000470202 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
USP41-203ENST00000470202 ZCCHC6Q5VYS8 1495 aaKnown RBP8.73□□□□□ -1.01
USP41-203ENST00000470202 KDM4FA0A1W2PPD8 638 aa8.73□□□□□ -1.01
USP41-203ENST00000470202 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
USP41-203ENST00000470202 HECW2Q9P2P5 1572 aa8.7□□□□□ -1.02
USP41-203ENST00000470202 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
USP41-203ENST00000470202 CEP164Q9UPV0 1460 aa8.66□□□□□ -1.02
USP41-203ENST00000470202 DISP3Q9P2K9 1392 aa8.62□□□□□ -1.03
USP41-203ENST00000470202 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
USP41-203ENST00000470202 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
USP41-203ENST00000470202 CHD1O14646 1710 aa8.6□□□□□ -1.03
USP41-203ENST00000470202 ZNF608Q9ULD9 1512 aaPredicted RBP8.59□□□□□ -1.03
USP41-203ENST00000470202 SYNJ2O15056 1496 aa8.56□□□□□ -1.04
USP41-203ENST00000470202 FANCD2Q9BXW9 1451 aa8.56□□□□□ -1.04
USP41-203ENST00000470202 URB2Q14146 1524 aaKnown RBP8.55□□□□□ -1.04
USP41-203ENST00000470202 EIF4G3O43432 1585 aaKnown RBP8.53□□□□□ -1.04
USP41-203ENST00000470202 PEG3Q9GZU2 1588 aa8.53□□□□□ -1.04
USP41-203ENST00000470202 CLASP1Q7Z460 1538 aa8.53□□□□□ -1.04
USP41-203ENST00000470202 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
USP41-203ENST00000470202 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.05
USP41-203ENST00000470202 ADGRL1O94910 1474 aa8.51□□□□□ -1.05
USP41-203ENST00000470202 KIF13AQ9H1H9 1805 aa8.5□□□□□ -1.05
USP41-203ENST00000470202 KDM6BO15054 1643 aa8.48□□□□□ -1.05
USP41-203ENST00000470202 GAPVD1Q14C86 1478 aa8.48□□□□□ -1.05
USP41-203ENST00000470202 FBLN2P98095 1184 aa8.44□□□□□ -1.06
USP41-203ENST00000470202 SYNJ1O43426 1573 aa8.42□□□□□ -1.06
USP41-203ENST00000470202 CFTRP13569 1480 aa8.37□□□□□ -1.07
USP41-203ENST00000470202 AQRO60306 1485 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP41-203ENST00000470202 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
USP41-203ENST00000470202 DIP2BQ9P265 1576 aa8.33□□□□□ -1.08
USP41-203ENST00000470202 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
USP41-203ENST00000470202 TARBP1Q13395 1621 aaKnown RBP8.3□□□□□ -1.08
USP41-203ENST00000470202 SNAPC4Q5SXM2 1469 aa8.3□□□□□ -1.08
USP41-203ENST00000470202 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
USP41-203ENST00000470202 MROH2BQ7Z745 1585 aa8.27□□□□□ -1.09
USP41-203ENST00000470202 TOP2BQ02880 1626 aa8.26□□□□□ -1.09
USP41-203ENST00000470202 MAPKBP1O60336 1514 aa8.26□□□□□ -1.09
USP41-203ENST00000470202 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
USP41-203ENST00000470202 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
USP41-203ENST00000470202 CHMP7Q8WUX9 453 aaPredicted RBP8.24□□□□□ -1.09
USP41-203ENST00000470202 TSPOAP1O95153 1857 aa8.2□□□□□ -1.1
USP41-203ENST00000470202 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
USP41-203ENST00000470202 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
USP41-203ENST00000470202 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
USP41-203ENST00000470202 WDR97A6NE52 1622 aa8.19□□□□□ -1.1
USP41-203ENST00000470202 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
USP41-203ENST00000470202 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
USP41-203ENST00000470202 POLA1P09884 1462 aaPredicted RBP8.16□□□□□ -1.1
USP41-203ENST00000470202 TDRD9Q8NDG6 1382 aaKnown RBP8.15□□□□□ -1.1
USP41-203ENST00000470202 GRIN2BQ13224 1484 aa8.13□□□□□ -1.11
USP41-203ENST00000470202 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
USP41-203ENST00000470202 PPRC1Q5VV67 1664 aaKnown RBP8.12□□□□□ -1.11
USP41-203ENST00000470202 COL17A1Q9UMD9 1497 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms