RNA–Protein interactions for RNA: ENST00000469893.2

S100A1-205, Transcript of S100 calcium binding protein A1, humanhuman

TSL 1 (best)

Gene S100A1, Length 2,621 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
S100A1-205ENST00000469893 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
S100A1-205ENST00000469893 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
S100A1-205ENST00000469893 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
S100A1-205ENST00000469893 ABCC9O60706 1549 aa21.3■■□□□ 1
S100A1-205ENST00000469893 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
S100A1-205ENST00000469893 SHROOM4Q9ULL8 1493 aa20.9■□□□□ 0.94
S100A1-205ENST00000469893 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
S100A1-205ENST00000469893 NACADO15069 1562 aa20.66■□□□□ 0.9
S100A1-205ENST00000469893 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
S100A1-205ENST00000469893 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
S100A1-205ENST00000469893 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
S100A1-205ENST00000469893 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
S100A1-205ENST00000469893 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
S100A1-205ENST00000469893 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
S100A1-205ENST00000469893 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
S100A1-205ENST00000469893 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
S100A1-205ENST00000469893 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
S100A1-205ENST00000469893 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
S100A1-205ENST00000469893 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
S100A1-205ENST00000469893 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
S100A1-205ENST00000469893 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
S100A1-205ENST00000469893 WIZO95785 1651 aa19.53■□□□□ 0.72
S100A1-205ENST00000469893 MYT1Q01538 1121 aa19.42■□□□□ 0.7
S100A1-205ENST00000469893 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
S100A1-205ENST00000469893 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
S100A1-205ENST00000469893 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
S100A1-205ENST00000469893 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
S100A1-205ENST00000469893 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
S100A1-205ENST00000469893 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
S100A1-205ENST00000469893 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
S100A1-205ENST00000469893 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
S100A1-205ENST00000469893 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
S100A1-205ENST00000469893 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
S100A1-205ENST00000469893 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
S100A1-205ENST00000469893 HRCP23327 699 aa18.97■□□□□ 0.63
S100A1-205ENST00000469893 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
S100A1-205ENST00000469893 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
S100A1-205ENST00000469893 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
S100A1-205ENST00000469893 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
S100A1-205ENST00000469893 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
S100A1-205ENST00000469893 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
S100A1-205ENST00000469893 CFTRP13569 1480 aa18.65■□□□□ 0.58
S100A1-205ENST00000469893 NESP48681 1621 aa18.65■□□□□ 0.58
S100A1-205ENST00000469893 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
S100A1-205ENST00000469893 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
S100A1-205ENST00000469893 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
S100A1-205ENST00000469893 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.55
S100A1-205ENST00000469893 PRDM2Q13029 1718 aa18.5■□□□□ 0.55
S100A1-205ENST00000469893 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
S100A1-205ENST00000469893 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
S100A1-205ENST00000469893 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
S100A1-205ENST00000469893 CUX1P39880 1505 aa18.4■□□□□ 0.54
S100A1-205ENST00000469893 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.54
S100A1-205ENST00000469893 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
S100A1-205ENST00000469893 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
S100A1-205ENST00000469893 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
S100A1-205ENST00000469893 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
S100A1-205ENST00000469893 SOGA1O94964 1423 aa18.33■□□□□ 0.53
S100A1-205ENST00000469893 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
S100A1-205ENST00000469893 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
S100A1-205ENST00000469893 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
S100A1-205ENST00000469893 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
S100A1-205ENST00000469893 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
S100A1-205ENST00000469893 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
S100A1-205ENST00000469893 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
S100A1-205ENST00000469893 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
S100A1-205ENST00000469893 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
S100A1-205ENST00000469893 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
S100A1-205ENST00000469893 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
S100A1-205ENST00000469893 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
S100A1-205ENST00000469893 CUX2O14529 1486 aa18.11■□□□□ 0.49
S100A1-205ENST00000469893 EEA1Q15075 1411 aa18.08■□□□□ 0.49
S100A1-205ENST00000469893 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
S100A1-205ENST00000469893 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
S100A1-205ENST00000469893 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
S100A1-205ENST00000469893 WDR62O43379 1518 aa18.04■□□□□ 0.48
S100A1-205ENST00000469893 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
S100A1-205ENST00000469893 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
S100A1-205ENST00000469893 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
S100A1-205ENST00000469893 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
S100A1-205ENST00000469893 PRKCSHP14314 528 aaPredicted RBP17.96■□□□□ 0.47
S100A1-205ENST00000469893 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
S100A1-205ENST00000469893 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
S100A1-205ENST00000469893 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
S100A1-205ENST00000469893 IGF1RP08069 1367 aa17.93■□□□□ 0.46
S100A1-205ENST00000469893 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
S100A1-205ENST00000469893 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
S100A1-205ENST00000469893 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
S100A1-205ENST00000469893 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
S100A1-205ENST00000469893 KIF21BO75037 1637 aa17.9■□□□□ 0.46
S100A1-205ENST00000469893 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.46
S100A1-205ENST00000469893 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
S100A1-205ENST00000469893 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
S100A1-205ENST00000469893 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
S100A1-205ENST00000469893 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
S100A1-205ENST00000469893 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
S100A1-205ENST00000469893 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
S100A1-205ENST00000469893 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
S100A1-205ENST00000469893 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
S100A1-205ENST00000469893 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms