RNA–Protein interactions for RNA: ENST00000469395.1

TMPRSS2-208, Transcript of transmembrane serine protease 2, humanhuman

TSL 2

Gene TMPRSS2, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-208ENST00000469395 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
TMPRSS2-208ENST00000469395 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
TMPRSS2-208ENST00000469395 ABCC9O60706 1549 aa30.38■■■□□ 2.45
TMPRSS2-208ENST00000469395 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
TMPRSS2-208ENST00000469395 NACADO15069 1562 aa29.48■■■□□ 2.31
TMPRSS2-208ENST00000469395 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
TMPRSS2-208ENST00000469395 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
TMPRSS2-208ENST00000469395 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
TMPRSS2-208ENST00000469395 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
TMPRSS2-208ENST00000469395 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
TMPRSS2-208ENST00000469395 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
TMPRSS2-208ENST00000469395 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
TMPRSS2-208ENST00000469395 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
TMPRSS2-208ENST00000469395 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
TMPRSS2-208ENST00000469395 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
TMPRSS2-208ENST00000469395 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
TMPRSS2-208ENST00000469395 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
TMPRSS2-208ENST00000469395 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
TMPRSS2-208ENST00000469395 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
TMPRSS2-208ENST00000469395 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
TMPRSS2-208ENST00000469395 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
TMPRSS2-208ENST00000469395 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
TMPRSS2-208ENST00000469395 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
TMPRSS2-208ENST00000469395 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
TMPRSS2-208ENST00000469395 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
TMPRSS2-208ENST00000469395 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
TMPRSS2-208ENST00000469395 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
TMPRSS2-208ENST00000469395 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
TMPRSS2-208ENST00000469395 WIZO95785 1651 aa26.92■■□□□ 1.9
TMPRSS2-208ENST00000469395 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
TMPRSS2-208ENST00000469395 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
TMPRSS2-208ENST00000469395 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
TMPRSS2-208ENST00000469395 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
TMPRSS2-208ENST00000469395 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
TMPRSS2-208ENST00000469395 NESP48681 1621 aa26.32■■□□□ 1.8
TMPRSS2-208ENST00000469395 CFTRP13569 1480 aa26.28■■□□□ 1.8
TMPRSS2-208ENST00000469395 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
TMPRSS2-208ENST00000469395 ERCC6Q03468 1493 aa26.25■■□□□ 1.79
TMPRSS2-208ENST00000469395 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
TMPRSS2-208ENST00000469395 FANCD2Q9BXW9 1451 aa26.06■■□□□ 1.76
TMPRSS2-208ENST00000469395 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
TMPRSS2-208ENST00000469395 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
TMPRSS2-208ENST00000469395 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
TMPRSS2-208ENST00000469395 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
TMPRSS2-208ENST00000469395 CUX2O14529 1486 aa25.91■■□□□ 1.74
TMPRSS2-208ENST00000469395 WDR62O43379 1518 aa25.84■■□□□ 1.73
TMPRSS2-208ENST00000469395 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
TMPRSS2-208ENST00000469395 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
TMPRSS2-208ENST00000469395 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
TMPRSS2-208ENST00000469395 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
TMPRSS2-208ENST00000469395 CUX1P39880 1505 aa25.53■■□□□ 1.68
TMPRSS2-208ENST00000469395 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
TMPRSS2-208ENST00000469395 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
TMPRSS2-208ENST00000469395 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
TMPRSS2-208ENST00000469395 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
TMPRSS2-208ENST00000469395 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
TMPRSS2-208ENST00000469395 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
TMPRSS2-208ENST00000469395 SOGA1O94964 1423 aa25.38■■□□□ 1.65
TMPRSS2-208ENST00000469395 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
TMPRSS2-208ENST00000469395 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
TMPRSS2-208ENST00000469395 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
TMPRSS2-208ENST00000469395 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
TMPRSS2-208ENST00000469395 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
TMPRSS2-208ENST00000469395 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
TMPRSS2-208ENST00000469395 EIF4G3O43432 1585 aaKnown RBP25.21■■□□□ 1.63
TMPRSS2-208ENST00000469395 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
TMPRSS2-208ENST00000469395 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMPRSS2-208ENST00000469395 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
TMPRSS2-208ENST00000469395 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
TMPRSS2-208ENST00000469395 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
TMPRSS2-208ENST00000469395 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
TMPRSS2-208ENST00000469395 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.61
TMPRSS2-208ENST00000469395 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
TMPRSS2-208ENST00000469395 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
TMPRSS2-208ENST00000469395 PBRM1Q86U86 1689 aa25■■□□□ 1.59
TMPRSS2-208ENST00000469395 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
TMPRSS2-208ENST00000469395 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
TMPRSS2-208ENST00000469395 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
TMPRSS2-208ENST00000469395 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
TMPRSS2-208ENST00000469395 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
TMPRSS2-208ENST00000469395 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
TMPRSS2-208ENST00000469395 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
TMPRSS2-208ENST00000469395 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
TMPRSS2-208ENST00000469395 FBLN2P98095 1184 aa24.83■■□□□ 1.57
TMPRSS2-208ENST00000469395 CHD1O14646 1710 aa24.82■■□□□ 1.56
TMPRSS2-208ENST00000469395 IGF1RP08069 1367 aa24.8■■□□□ 1.56
TMPRSS2-208ENST00000469395 CUL7Q14999 1698 aa24.79■■□□□ 1.56
TMPRSS2-208ENST00000469395 EEA1Q15075 1411 aa24.75■■□□□ 1.55
TMPRSS2-208ENST00000469395 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
TMPRSS2-208ENST00000469395 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
TMPRSS2-208ENST00000469395 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
TMPRSS2-208ENST00000469395 NUP160Q12769 1436 aa24.62■■□□□ 1.53
TMPRSS2-208ENST00000469395 CLASP1Q7Z460 1538 aa24.59■■□□□ 1.53
TMPRSS2-208ENST00000469395 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
TMPRSS2-208ENST00000469395 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
TMPRSS2-208ENST00000469395 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
TMPRSS2-208ENST00000469395 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
TMPRSS2-208ENST00000469395 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
TMPRSS2-208ENST00000469395 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
TMPRSS2-208ENST00000469395 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms