RNA–Protein interactions for RNA: ENST00000469242.1

FSCN3-203, Transcript of fascin actin-bundling protein 3, humanhuman

TSL 3

Gene FSCN3, Length 854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN3-203ENST00000469242 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
FSCN3-203ENST00000469242 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
FSCN3-203ENST00000469242 ABCC9O60706 1549 aa26.96■■□□□ 1.91
FSCN3-203ENST00000469242 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
FSCN3-203ENST00000469242 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
FSCN3-203ENST00000469242 NACADO15069 1562 aa26.14■■□□□ 1.78
FSCN3-203ENST00000469242 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
FSCN3-203ENST00000469242 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
FSCN3-203ENST00000469242 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
FSCN3-203ENST00000469242 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
FSCN3-203ENST00000469242 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
FSCN3-203ENST00000469242 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
FSCN3-203ENST00000469242 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
FSCN3-203ENST00000469242 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
FSCN3-203ENST00000469242 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
FSCN3-203ENST00000469242 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
FSCN3-203ENST00000469242 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
FSCN3-203ENST00000469242 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
FSCN3-203ENST00000469242 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
FSCN3-203ENST00000469242 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
FSCN3-203ENST00000469242 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
FSCN3-203ENST00000469242 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
FSCN3-203ENST00000469242 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
FSCN3-203ENST00000469242 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
FSCN3-203ENST00000469242 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
FSCN3-203ENST00000469242 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
FSCN3-203ENST00000469242 WIZO95785 1651 aa24.05■■□□□ 1.44
FSCN3-203ENST00000469242 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
FSCN3-203ENST00000469242 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
FSCN3-203ENST00000469242 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
FSCN3-203ENST00000469242 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
FSCN3-203ENST00000469242 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
FSCN3-203ENST00000469242 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
FSCN3-203ENST00000469242 NESP48681 1621 aa23.44■■□□□ 1.34
FSCN3-203ENST00000469242 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
FSCN3-203ENST00000469242 CFTRP13569 1480 aa23.4■■□□□ 1.34
FSCN3-203ENST00000469242 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
FSCN3-203ENST00000469242 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
FSCN3-203ENST00000469242 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
FSCN3-203ENST00000469242 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
FSCN3-203ENST00000469242 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
FSCN3-203ENST00000469242 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
FSCN3-203ENST00000469242 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
FSCN3-203ENST00000469242 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
FSCN3-203ENST00000469242 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
FSCN3-203ENST00000469242 WDR62O43379 1518 aa22.89■■□□□ 1.26
FSCN3-203ENST00000469242 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
FSCN3-203ENST00000469242 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
FSCN3-203ENST00000469242 CUX2O14529 1486 aa22.84■■□□□ 1.25
FSCN3-203ENST00000469242 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
FSCN3-203ENST00000469242 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
FSCN3-203ENST00000469242 CUX1P39880 1505 aa22.8■■□□□ 1.24
FSCN3-203ENST00000469242 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
FSCN3-203ENST00000469242 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
FSCN3-203ENST00000469242 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
FSCN3-203ENST00000469242 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
FSCN3-203ENST00000469242 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
FSCN3-203ENST00000469242 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
FSCN3-203ENST00000469242 SOGA1O94964 1423 aa22.62■■□□□ 1.21
FSCN3-203ENST00000469242 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
FSCN3-203ENST00000469242 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
FSCN3-203ENST00000469242 TARBP1Q13395 1621 aaKnown RBP22.54■■□□□ 1.2
FSCN3-203ENST00000469242 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
FSCN3-203ENST00000469242 ZNF608Q9ULD9 1512 aaPredicted RBP22.48■■□□□ 1.19
FSCN3-203ENST00000469242 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
FSCN3-203ENST00000469242 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
FSCN3-203ENST00000469242 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.18
FSCN3-203ENST00000469242 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
FSCN3-203ENST00000469242 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
FSCN3-203ENST00000469242 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
FSCN3-203ENST00000469242 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
FSCN3-203ENST00000469242 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
FSCN3-203ENST00000469242 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
FSCN3-203ENST00000469242 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
FSCN3-203ENST00000469242 IGF1RP08069 1367 aa22.21■■□□□ 1.15
FSCN3-203ENST00000469242 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
FSCN3-203ENST00000469242 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
FSCN3-203ENST00000469242 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
FSCN3-203ENST00000469242 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
FSCN3-203ENST00000469242 EEA1Q15075 1411 aa22.12■■□□□ 1.13
FSCN3-203ENST00000469242 FBLN2P98095 1184 aa22.11■■□□□ 1.13
FSCN3-203ENST00000469242 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
FSCN3-203ENST00000469242 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
FSCN3-203ENST00000469242 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
FSCN3-203ENST00000469242 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
FSCN3-203ENST00000469242 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
FSCN3-203ENST00000469242 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
FSCN3-203ENST00000469242 ADAMTS12P58397 1594 aa22.07■■□□□ 1.12
FSCN3-203ENST00000469242 CUL7Q14999 1698 aa22.03■■□□□ 1.12
FSCN3-203ENST00000469242 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
FSCN3-203ENST00000469242 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
FSCN3-203ENST00000469242 CHD1O14646 1710 aa21.98■■□□□ 1.11
FSCN3-203ENST00000469242 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
FSCN3-203ENST00000469242 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
FSCN3-203ENST00000469242 NUP160Q12769 1436 aa21.89■■□□□ 1.1
FSCN3-203ENST00000469242 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
FSCN3-203ENST00000469242 KIF21BO75037 1637 aa21.81■■□□□ 1.08
FSCN3-203ENST00000469242 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
FSCN3-203ENST00000469242 KIAA0586Q9BVV6 1533 aa21.79■■□□□ 1.08
FSCN3-203ENST00000469242 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms