RNA–Protein interactions for RNA: ENST00000468885.1

GNL3-206, Transcript of G protein nucleolar 3, humanhuman

TSL 1 (best)

Gene GNL3, Length 263 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-206ENST00000468885 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
GNL3-206ENST00000468885 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
GNL3-206ENST00000468885 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
GNL3-206ENST00000468885 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
GNL3-206ENST00000468885 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
GNL3-206ENST00000468885 ABCC9O60706 1549 aa13.43□□□□□ -0.26
GNL3-206ENST00000468885 FOXD1Q16676 465 aa13.26□□□□□ -0.29
GNL3-206ENST00000468885 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
GNL3-206ENST00000468885 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
GNL3-206ENST00000468885 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
GNL3-206ENST00000468885 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
GNL3-206ENST00000468885 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
GNL3-206ENST00000468885 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
GNL3-206ENST00000468885 MSH5O43196 834 aa12.43□□□□□ -0.42
GNL3-206ENST00000468885 NACADO15069 1562 aa12.41□□□□□ -0.42
GNL3-206ENST00000468885 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
GNL3-206ENST00000468885 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
GNL3-206ENST00000468885 ADRA2BP18089 450 aa12.32□□□□□ -0.44
GNL3-206ENST00000468885 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
GNL3-206ENST00000468885 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
GNL3-206ENST00000468885 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
GNL3-206ENST00000468885 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
GNL3-206ENST00000468885 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
GNL3-206ENST00000468885 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
GNL3-206ENST00000468885 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
GNL3-206ENST00000468885 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
GNL3-206ENST00000468885 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
GNL3-206ENST00000468885 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
GNL3-206ENST00000468885 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
GNL3-206ENST00000468885 DCAF1Q9Y4B6 1507 aa11.8□□□□□ -0.52
GNL3-206ENST00000468885 ERCC6Q03468 1493 aa11.69□□□□□ -0.54
GNL3-206ENST00000468885 CUX2O14529 1486 aa11.67□□□□□ -0.54
GNL3-206ENST00000468885 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
GNL3-206ENST00000468885 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
GNL3-206ENST00000468885 NESP48681 1621 aa11.38□□□□□ -0.59
GNL3-206ENST00000468885 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
GNL3-206ENST00000468885 SMARCA2P51531 1590 aa11.36□□□□□ -0.59
GNL3-206ENST00000468885 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
GNL3-206ENST00000468885 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
GNL3-206ENST00000468885 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
GNL3-206ENST00000468885 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
GNL3-206ENST00000468885 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
GNL3-206ENST00000468885 DMRT2Q9Y5R5 561 aa11.27□□□□□ -0.61
GNL3-206ENST00000468885 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
GNL3-206ENST00000468885 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
GNL3-206ENST00000468885 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
GNL3-206ENST00000468885 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
GNL3-206ENST00000468885 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
GNL3-206ENST00000468885 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
GNL3-206ENST00000468885 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
GNL3-206ENST00000468885 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
GNL3-206ENST00000468885 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
GNL3-206ENST00000468885 WDR62O43379 1518 aa11.07□□□□□ -0.64
GNL3-206ENST00000468885 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
GNL3-206ENST00000468885 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
GNL3-206ENST00000468885 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
GNL3-206ENST00000468885 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
GNL3-206ENST00000468885 FANCD2Q9BXW9 1451 aa11.02□□□□□ -0.65
GNL3-206ENST00000468885 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
GNL3-206ENST00000468885 RIMBP3CA6NJZ7 1639 aa10.92□□□□□ -0.66
GNL3-206ENST00000468885 RIMBP3BA6NNM3 1639 aa10.92□□□□□ -0.66
GNL3-206ENST00000468885 RIMBP3Q9UFD9 1639 aa10.92□□□□□ -0.66
GNL3-206ENST00000468885 FBLN2P98095 1184 aa10.92□□□□□ -0.66
GNL3-206ENST00000468885 CFTRP13569 1480 aa10.91□□□□□ -0.66
GNL3-206ENST00000468885 WIZO95785 1651 aa10.9□□□□□ -0.66
GNL3-206ENST00000468885 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
GNL3-206ENST00000468885 URB2Q14146 1524 aaKnown RBP10.89□□□□□ -0.67
GNL3-206ENST00000468885 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
GNL3-206ENST00000468885 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
GNL3-206ENST00000468885 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
GNL3-206ENST00000468885 ZNF608Q9ULD9 1512 aaPredicted RBP10.83□□□□□ -0.68
GNL3-206ENST00000468885 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
GNL3-206ENST00000468885 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
GNL3-206ENST00000468885 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
GNL3-206ENST00000468885 TOP2AP11388 1531 aaKnown RBP10.75□□□□□ -0.69
GNL3-206ENST00000468885 ABCC8Q09428 1581 aa10.75□□□□□ -0.69
GNL3-206ENST00000468885 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.691e-6■■■■□ 19.8
GNL3-206ENST00000468885 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
GNL3-206ENST00000468885 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
GNL3-206ENST00000468885 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
GNL3-206ENST00000468885 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
GNL3-206ENST00000468885 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
GNL3-206ENST00000468885 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
GNL3-206ENST00000468885 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
GNL3-206ENST00000468885 CHD1O14646 1710 aa10.66□□□□□ -0.7
GNL3-206ENST00000468885 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
GNL3-206ENST00000468885 SOGA1O94964 1423 aa10.65□□□□□ -0.7
GNL3-206ENST00000468885 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
GNL3-206ENST00000468885 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
GNL3-206ENST00000468885 POLA1P09884 1462 aaPredicted RBP10.61□□□□□ -0.71
GNL3-206ENST00000468885 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
GNL3-206ENST00000468885 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
GNL3-206ENST00000468885 RNF39Q9H2S5 420 aa10.6□□□□□ -0.71
GNL3-206ENST00000468885 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
GNL3-206ENST00000468885 TARBP1Q13395 1621 aaKnown RBP10.59□□□□□ -0.71
GNL3-206ENST00000468885 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
GNL3-206ENST00000468885 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
GNL3-206ENST00000468885 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
GNL3-206ENST00000468885 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
GNL3-206ENST00000468885 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms