RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
COL4A3-203ENST00000468753 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
COL4A3-203ENST00000468753 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
COL4A3-203ENST00000468753 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
COL4A3-203ENST00000468753 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
COL4A3-203ENST00000468753 FOXD1Q16676 465 aa19.49■□□□□ 0.71
COL4A3-203ENST00000468753 POTEDQ86YR6 584 aa19.19■□□□□ 0.66
COL4A3-203ENST00000468753 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
COL4A3-203ENST00000468753 MSH5O43196 834 aa18.52■□□□□ 0.56
COL4A3-203ENST00000468753 ABCC9O60706 1549 aa18.4■□□□□ 0.54
COL4A3-203ENST00000468753 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
COL4A3-203ENST00000468753 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
COL4A3-203ENST00000468753 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
COL4A3-203ENST00000468753 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
COL4A3-203ENST00000468753 ADRA2BP18089 450 aa17.65■□□□□ 0.42
COL4A3-203ENST00000468753 NACADO15069 1562 aa17.62■□□□□ 0.41
COL4A3-203ENST00000468753 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
COL4A3-203ENST00000468753 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
COL4A3-203ENST00000468753 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
COL4A3-203ENST00000468753 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
COL4A3-203ENST00000468753 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.35
COL4A3-203ENST00000468753 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL4A3-203ENST00000468753 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
COL4A3-203ENST00000468753 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
COL4A3-203ENST00000468753 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
COL4A3-203ENST00000468753 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
COL4A3-203ENST00000468753 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
COL4A3-203ENST00000468753 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
COL4A3-203ENST00000468753 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
COL4A3-203ENST00000468753 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
COL4A3-203ENST00000468753 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
COL4A3-203ENST00000468753 SMARCA4P51532 1647 aa16.33■□□□□ 0.2
COL4A3-203ENST00000468753 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
COL4A3-203ENST00000468753 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
COL4A3-203ENST00000468753 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
COL4A3-203ENST00000468753 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
COL4A3-203ENST00000468753 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
COL4A3-203ENST00000468753 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
COL4A3-203ENST00000468753 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
COL4A3-203ENST00000468753 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
COL4A3-203ENST00000468753 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
COL4A3-203ENST00000468753 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
COL4A3-203ENST00000468753 WIZO95785 1651 aa16.01■□□□□ 0.15
COL4A3-203ENST00000468753 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
COL4A3-203ENST00000468753 NESP48681 1621 aa15.91■□□□□ 0.14
COL4A3-203ENST00000468753 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
COL4A3-203ENST00000468753 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
COL4A3-203ENST00000468753 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
COL4A3-203ENST00000468753 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
COL4A3-203ENST00000468753 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
COL4A3-203ENST00000468753 CUX2O14529 1486 aa15.75■□□□□ 0.11
COL4A3-203ENST00000468753 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
COL4A3-203ENST00000468753 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
COL4A3-203ENST00000468753 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
COL4A3-203ENST00000468753 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
COL4A3-203ENST00000468753 CFTRP13569 1480 aa15.68■□□□□ 0.1
COL4A3-203ENST00000468753 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
COL4A3-203ENST00000468753 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
COL4A3-203ENST00000468753 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
COL4A3-203ENST00000468753 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
COL4A3-203ENST00000468753 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
COL4A3-203ENST00000468753 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
COL4A3-203ENST00000468753 WDR62O43379 1518 aa15.56■□□□□ 0.08
COL4A3-203ENST00000468753 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
COL4A3-203ENST00000468753 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
COL4A3-203ENST00000468753 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
COL4A3-203ENST00000468753 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
COL4A3-203ENST00000468753 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
COL4A3-203ENST00000468753 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
COL4A3-203ENST00000468753 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
COL4A3-203ENST00000468753 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
COL4A3-203ENST00000468753 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
COL4A3-203ENST00000468753 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
COL4A3-203ENST00000468753 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
COL4A3-203ENST00000468753 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
COL4A3-203ENST00000468753 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
COL4A3-203ENST00000468753 CUX1P39880 1505 aa15.21■□□□□ 0.03
COL4A3-203ENST00000468753 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
COL4A3-203ENST00000468753 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
COL4A3-203ENST00000468753 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
COL4A3-203ENST00000468753 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
COL4A3-203ENST00000468753 SOGA1O94964 1423 aa15.13■□□□□ 0.01
COL4A3-203ENST00000468753 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL4A3-203ENST00000468753 WDR97A6NE52 1622 aa15.06■□□□□ 0
COL4A3-203ENST00000468753 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
COL4A3-203ENST00000468753 OSCARQ8IYS5 282 aa15.05■□□□□ -0
COL4A3-203ENST00000468753 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
COL4A3-203ENST00000468753 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
COL4A3-203ENST00000468753 TOP2BQ02880 1626 aa15.03■□□□□ -0
COL4A3-203ENST00000468753 SYNJ1O43426 1573 aa15.03■□□□□ -0
COL4A3-203ENST00000468753 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
COL4A3-203ENST00000468753 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
COL4A3-203ENST00000468753 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
COL4A3-203ENST00000468753 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
COL4A3-203ENST00000468753 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
COL4A3-203ENST00000468753 CHD1O14646 1710 aa14.97□□□□□ -0.01
COL4A3-203ENST00000468753 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
COL4A3-203ENST00000468753 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
COL4A3-203ENST00000468753 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-203ENST00000468753 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms