RNA–Protein interactions for RNA: ENST00000468617.1

CTSE-203, Transcript of cathepsin E, humanhuman

TSL 5

Gene CTSE, Length 647 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-203ENST00000468617 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
CTSE-203ENST00000468617 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
CTSE-203ENST00000468617 ABCC9O60706 1549 aa32.64■■■□□ 2.82
CTSE-203ENST00000468617 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
CTSE-203ENST00000468617 NACADO15069 1562 aa31.61■■■□□ 2.65
CTSE-203ENST00000468617 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
CTSE-203ENST00000468617 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
CTSE-203ENST00000468617 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
CTSE-203ENST00000468617 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
CTSE-203ENST00000468617 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
CTSE-203ENST00000468617 SCRIBQ14160 1630 aa30.76■■■□□ 2.51
CTSE-203ENST00000468617 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
CTSE-203ENST00000468617 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.47
CTSE-203ENST00000468617 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
CTSE-203ENST00000468617 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
CTSE-203ENST00000468617 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
CTSE-203ENST00000468617 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
CTSE-203ENST00000468617 CC2D2AQ9P2K1 1620 aa29.57■■■□□ 2.32
CTSE-203ENST00000468617 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
CTSE-203ENST00000468617 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
CTSE-203ENST00000468617 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
CTSE-203ENST00000468617 ATAD2BQ9ULI0 1458 aa29.22■■■□□ 2.27
CTSE-203ENST00000468617 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
CTSE-203ENST00000468617 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
CTSE-203ENST00000468617 NCAPD3P42695 1498 aa29.16■■■□□ 2.26
CTSE-203ENST00000468617 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
CTSE-203ENST00000468617 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
CTSE-203ENST00000468617 WIZO95785 1651 aa29.03■■■□□ 2.24
CTSE-203ENST00000468617 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
CTSE-203ENST00000468617 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
CTSE-203ENST00000468617 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
CTSE-203ENST00000468617 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
CTSE-203ENST00000468617 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
CTSE-203ENST00000468617 NESP48681 1621 aa28.35■■■□□ 2.13
CTSE-203ENST00000468617 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
CTSE-203ENST00000468617 CFTRP13569 1480 aa28.22■■■□□ 2.11
CTSE-203ENST00000468617 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
CTSE-203ENST00000468617 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
CTSE-203ENST00000468617 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
CTSE-203ENST00000468617 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
CTSE-203ENST00000468617 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
CTSE-203ENST00000468617 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
CTSE-203ENST00000468617 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
CTSE-203ENST00000468617 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
CTSE-203ENST00000468617 WDR62O43379 1518 aa27.74■■■□□ 2.03
CTSE-203ENST00000468617 CUX2O14529 1486 aa27.72■■■□□ 2.03
CTSE-203ENST00000468617 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
CTSE-203ENST00000468617 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
CTSE-203ENST00000468617 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
CTSE-203ENST00000468617 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
CTSE-203ENST00000468617 CUX1P39880 1505 aa27.51■■□□□ 1.99
CTSE-203ENST00000468617 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
CTSE-203ENST00000468617 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
CTSE-203ENST00000468617 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
CTSE-203ENST00000468617 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
CTSE-203ENST00000468617 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
CTSE-203ENST00000468617 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
CTSE-203ENST00000468617 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
CTSE-203ENST00000468617 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
CTSE-203ENST00000468617 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
CTSE-203ENST00000468617 SOGA1O94964 1423 aa27.24■■□□□ 1.95
CTSE-203ENST00000468617 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
CTSE-203ENST00000468617 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
CTSE-203ENST00000468617 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
CTSE-203ENST00000468617 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
CTSE-203ENST00000468617 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.92
CTSE-203ENST00000468617 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
CTSE-203ENST00000468617 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
CTSE-203ENST00000468617 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
CTSE-203ENST00000468617 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
CTSE-203ENST00000468617 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
CTSE-203ENST00000468617 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
CTSE-203ENST00000468617 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
CTSE-203ENST00000468617 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
CTSE-203ENST00000468617 KIF27Q86VH2 1401 aa26.81■■□□□ 1.88
CTSE-203ENST00000468617 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
CTSE-203ENST00000468617 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
CTSE-203ENST00000468617 CHD1O14646 1710 aa26.71■■□□□ 1.87
CTSE-203ENST00000468617 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
CTSE-203ENST00000468617 SYNJ2O15056 1496 aa26.69■■□□□ 1.86
CTSE-203ENST00000468617 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
CTSE-203ENST00000468617 IGF1RP08069 1367 aa26.67■■□□□ 1.86
CTSE-203ENST00000468617 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
CTSE-203ENST00000468617 CUL7Q14999 1698 aa26.62■■□□□ 1.85
CTSE-203ENST00000468617 FBLN2P98095 1184 aa26.6■■□□□ 1.85
CTSE-203ENST00000468617 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
CTSE-203ENST00000468617 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
CTSE-203ENST00000468617 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
CTSE-203ENST00000468617 EEA1Q15075 1411 aa26.51■■□□□ 1.83
CTSE-203ENST00000468617 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
CTSE-203ENST00000468617 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
CTSE-203ENST00000468617 NUP160Q12769 1436 aa26.44■■□□□ 1.82
CTSE-203ENST00000468617 CEP170Q5SW79 1584 aa26.43■■□□□ 1.82
CTSE-203ENST00000468617 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
CTSE-203ENST00000468617 PRXQ9BXM0 1461 aa26.41■■□□□ 1.82
CTSE-203ENST00000468617 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
CTSE-203ENST00000468617 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
CTSE-203ENST00000468617 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
CTSE-203ENST00000468617 KIAA0586Q9BVV6 1533 aa26.25■■□□□ 1.79
CTSE-203ENST00000468617 KIF21BO75037 1637 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms