RNA–Protein interactions for RNA: ENST00000467827.1

SDK1-205, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 5

Gene SDK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-205ENST00000467827 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
SDK1-205ENST00000467827 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
SDK1-205ENST00000467827 ABCC9O60706 1549 aa32.32■■■□□ 2.76
SDK1-205ENST00000467827 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
SDK1-205ENST00000467827 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
SDK1-205ENST00000467827 NACADO15069 1562 aa31.26■■■□□ 2.6
SDK1-205ENST00000467827 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
SDK1-205ENST00000467827 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
SDK1-205ENST00000467827 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
SDK1-205ENST00000467827 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
SDK1-205ENST00000467827 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
SDK1-205ENST00000467827 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
SDK1-205ENST00000467827 BICRAQ9NZM4 1560 aa30.14■■■□□ 2.42
SDK1-205ENST00000467827 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
SDK1-205ENST00000467827 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
SDK1-205ENST00000467827 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.29
SDK1-205ENST00000467827 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
SDK1-205ENST00000467827 CC2D2AQ9P2K1 1620 aa29.19■■■□□ 2.26
SDK1-205ENST00000467827 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
SDK1-205ENST00000467827 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
SDK1-205ENST00000467827 MROH2BQ7Z745 1585 aa28.94■■■□□ 2.22
SDK1-205ENST00000467827 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
SDK1-205ENST00000467827 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
SDK1-205ENST00000467827 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
SDK1-205ENST00000467827 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
SDK1-205ENST00000467827 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
SDK1-205ENST00000467827 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
SDK1-205ENST00000467827 HMGXB3Q12766 1538 aa28.68■■■□□ 2.18
SDK1-205ENST00000467827 WIZO95785 1651 aa28.61■■■□□ 2.17
SDK1-205ENST00000467827 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
SDK1-205ENST00000467827 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
SDK1-205ENST00000467827 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
SDK1-205ENST00000467827 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
SDK1-205ENST00000467827 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
SDK1-205ENST00000467827 NESP48681 1621 aa28■■■□□ 2.07
SDK1-205ENST00000467827 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
SDK1-205ENST00000467827 CFTRP13569 1480 aa27.91■■■□□ 2.06
SDK1-205ENST00000467827 ERCC6Q03468 1493 aa27.91■■■□□ 2.06
SDK1-205ENST00000467827 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
SDK1-205ENST00000467827 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
SDK1-205ENST00000467827 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
SDK1-205ENST00000467827 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
SDK1-205ENST00000467827 PRDM2Q13029 1718 aa27.55■■■□□ 2
SDK1-205ENST00000467827 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
SDK1-205ENST00000467827 CUX2O14529 1486 aa27.46■■□□□ 1.99
SDK1-205ENST00000467827 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
SDK1-205ENST00000467827 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
SDK1-205ENST00000467827 WDR62O43379 1518 aa27.37■■□□□ 1.97
SDK1-205ENST00000467827 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
SDK1-205ENST00000467827 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
SDK1-205ENST00000467827 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
SDK1-205ENST00000467827 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
SDK1-205ENST00000467827 CUX1P39880 1505 aa27.13■■□□□ 1.93
SDK1-205ENST00000467827 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
SDK1-205ENST00000467827 SOGA1O94964 1423 aa27.05■■□□□ 1.92
SDK1-205ENST00000467827 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
SDK1-205ENST00000467827 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
SDK1-205ENST00000467827 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
SDK1-205ENST00000467827 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
SDK1-205ENST00000467827 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
SDK1-205ENST00000467827 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
SDK1-205ENST00000467827 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SDK1-205ENST00000467827 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
SDK1-205ENST00000467827 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
SDK1-205ENST00000467827 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
SDK1-205ENST00000467827 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
SDK1-205ENST00000467827 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.88
SDK1-205ENST00000467827 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
SDK1-205ENST00000467827 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
SDK1-205ENST00000467827 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
SDK1-205ENST00000467827 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.87
SDK1-205ENST00000467827 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
SDK1-205ENST00000467827 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
SDK1-205ENST00000467827 FBLN2P98095 1184 aa26.57■■□□□ 1.84
SDK1-205ENST00000467827 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
SDK1-205ENST00000467827 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
SDK1-205ENST00000467827 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
SDK1-205ENST00000467827 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
SDK1-205ENST00000467827 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
SDK1-205ENST00000467827 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
SDK1-205ENST00000467827 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
SDK1-205ENST00000467827 IGF1RP08069 1367 aa26.45■■□□□ 1.82
SDK1-205ENST00000467827 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
SDK1-205ENST00000467827 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
SDK1-205ENST00000467827 DNAJC5Q9H3Z4 198 aa26.37■■□□□ 1.81
SDK1-205ENST00000467827 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
SDK1-205ENST00000467827 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.8
SDK1-205ENST00000467827 EEA1Q15075 1411 aa26.31■■□□□ 1.8
SDK1-205ENST00000467827 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
SDK1-205ENST00000467827 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
SDK1-205ENST00000467827 CHD1O14646 1710 aa26.28■■□□□ 1.8
SDK1-205ENST00000467827 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
SDK1-205ENST00000467827 CUL7Q14999 1698 aa26.27■■□□□ 1.8
SDK1-205ENST00000467827 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
SDK1-205ENST00000467827 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
SDK1-205ENST00000467827 NUP160Q12769 1436 aa26.14■■□□□ 1.77
SDK1-205ENST00000467827 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
SDK1-205ENST00000467827 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
SDK1-205ENST00000467827 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
SDK1-205ENST00000467827 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms