RNA–Protein interactions for RNA: ENST00000467565.1

PCP4-203, Transcript of Purkinje cell protein 4, humanhuman

TSL 5

Gene PCP4, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-203ENST00000467565 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
PCP4-203ENST00000467565 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
PCP4-203ENST00000467565 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
PCP4-203ENST00000467565 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
PCP4-203ENST00000467565 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
PCP4-203ENST00000467565 ABCC9O60706 1549 aa14.78□□□□□ -0.04
PCP4-203ENST00000467565 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
PCP4-203ENST00000467565 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
PCP4-203ENST00000467565 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
PCP4-203ENST00000467565 NACADO15069 1562 aa14.49□□□□□ -0.09
PCP4-203ENST00000467565 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
PCP4-203ENST00000467565 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
PCP4-203ENST00000467565 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
PCP4-203ENST00000467565 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
PCP4-203ENST00000467565 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
PCP4-203ENST00000467565 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCP4-203ENST00000467565 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
PCP4-203ENST00000467565 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
PCP4-203ENST00000467565 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
PCP4-203ENST00000467565 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
PCP4-203ENST00000467565 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
PCP4-203ENST00000467565 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
PCP4-203ENST00000467565 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
PCP4-203ENST00000467565 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
PCP4-203ENST00000467565 WIZO95785 1651 aa13.59□□□□□ -0.23
PCP4-203ENST00000467565 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
PCP4-203ENST00000467565 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
PCP4-203ENST00000467565 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
PCP4-203ENST00000467565 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
PCP4-203ENST00000467565 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
PCP4-203ENST00000467565 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
PCP4-203ENST00000467565 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
PCP4-203ENST00000467565 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
PCP4-203ENST00000467565 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
PCP4-203ENST00000467565 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
PCP4-203ENST00000467565 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
PCP4-203ENST00000467565 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
PCP4-203ENST00000467565 CFTRP13569 1480 aa13.1□□□□□ -0.31
PCP4-203ENST00000467565 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
PCP4-203ENST00000467565 NESP48681 1621 aa12.99□□□□□ -0.33
PCP4-203ENST00000467565 FOXD1Q16676 465 aa12.97□□□□□ -0.33
PCP4-203ENST00000467565 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
PCP4-203ENST00000467565 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
PCP4-203ENST00000467565 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
PCP4-203ENST00000467565 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
PCP4-203ENST00000467565 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
PCP4-203ENST00000467565 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
PCP4-203ENST00000467565 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
PCP4-203ENST00000467565 CUX1P39880 1505 aa12.86□□□□□ -0.35
PCP4-203ENST00000467565 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
PCP4-203ENST00000467565 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
PCP4-203ENST00000467565 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
PCP4-203ENST00000467565 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
PCP4-203ENST00000467565 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
PCP4-203ENST00000467565 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
PCP4-203ENST00000467565 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
PCP4-203ENST00000467565 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
PCP4-203ENST00000467565 SOGA1O94964 1423 aa12.74□□□□□ -0.37
PCP4-203ENST00000467565 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
PCP4-203ENST00000467565 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
PCP4-203ENST00000467565 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
PCP4-203ENST00000467565 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
PCP4-203ENST00000467565 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
PCP4-203ENST00000467565 WDR62O43379 1518 aa12.65□□□□□ -0.38
PCP4-203ENST00000467565 CUX2O14529 1486 aa12.65□□□□□ -0.38
PCP4-203ENST00000467565 RAD54L2Q9Y4B4 1467 aa12.64□□□□□ -0.39
PCP4-203ENST00000467565 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
PCP4-203ENST00000467565 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
PCP4-203ENST00000467565 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
PCP4-203ENST00000467565 EEA1Q15075 1411 aa12.61□□□□□ -0.39
PCP4-203ENST00000467565 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
PCP4-203ENST00000467565 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
PCP4-203ENST00000467565 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
PCP4-203ENST00000467565 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
PCP4-203ENST00000467565 IGF1RP08069 1367 aa12.56□□□□□ -0.4
PCP4-203ENST00000467565 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
PCP4-203ENST00000467565 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
PCP4-203ENST00000467565 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
PCP4-203ENST00000467565 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
PCP4-203ENST00000467565 IFT140Q96RY7 1462 aa12.5□□□□□ -0.41
PCP4-203ENST00000467565 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
PCP4-203ENST00000467565 KIF21BO75037 1637 aa12.48□□□□□ -0.41
PCP4-203ENST00000467565 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
PCP4-203ENST00000467565 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCP4-203ENST00000467565 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
PCP4-203ENST00000467565 MSH5O43196 834 aa12.43□□□□□ -0.42
PCP4-203ENST00000467565 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
PCP4-203ENST00000467565 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
PCP4-203ENST00000467565 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
PCP4-203ENST00000467565 GOLGA3Q08378 1498 aa12.41□□□□□ -0.42
PCP4-203ENST00000467565 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
PCP4-203ENST00000467565 GRIN2BQ13224 1484 aa12.38□□□□□ -0.43
PCP4-203ENST00000467565 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
PCP4-203ENST00000467565 CUL7Q14999 1698 aa12.35□□□□□ -0.43
PCP4-203ENST00000467565 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
PCP4-203ENST00000467565 ADAMTS12P58397 1594 aa12.34□□□□□ -0.43
PCP4-203ENST00000467565 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
PCP4-203ENST00000467565 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
PCP4-203ENST00000467565 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
PCP4-203ENST00000467565 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms