RNA–Protein interactions for RNA: ENST00000467045.5

COL21A1-206, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 2,291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-206ENST00000467045 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
COL21A1-206ENST00000467045 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
COL21A1-206ENST00000467045 ABCC9O60706 1549 aa23.61■■□□□ 1.37
COL21A1-206ENST00000467045 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
COL21A1-206ENST00000467045 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
COL21A1-206ENST00000467045 NACADO15069 1562 aa22.8■■□□□ 1.24
COL21A1-206ENST00000467045 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
COL21A1-206ENST00000467045 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
COL21A1-206ENST00000467045 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
COL21A1-206ENST00000467045 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
COL21A1-206ENST00000467045 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
COL21A1-206ENST00000467045 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
COL21A1-206ENST00000467045 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
COL21A1-206ENST00000467045 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
COL21A1-206ENST00000467045 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
COL21A1-206ENST00000467045 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
COL21A1-206ENST00000467045 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
COL21A1-206ENST00000467045 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
COL21A1-206ENST00000467045 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
COL21A1-206ENST00000467045 SMARCA4P51532 1647 aa21.29■■□□□ 1
COL21A1-206ENST00000467045 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
COL21A1-206ENST00000467045 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
COL21A1-206ENST00000467045 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.97
COL21A1-206ENST00000467045 SMARCA2P51531 1590 aa21.09■□□□□ 0.97
COL21A1-206ENST00000467045 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
COL21A1-206ENST00000467045 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
COL21A1-206ENST00000467045 WIZO95785 1651 aa21.04■□□□□ 0.96
COL21A1-206ENST00000467045 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
COL21A1-206ENST00000467045 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
COL21A1-206ENST00000467045 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
COL21A1-206ENST00000467045 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
COL21A1-206ENST00000467045 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
COL21A1-206ENST00000467045 NESP48681 1621 aa20.52■□□□□ 0.88
COL21A1-206ENST00000467045 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
COL21A1-206ENST00000467045 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
COL21A1-206ENST00000467045 CFTRP13569 1480 aa20.41■□□□□ 0.86
COL21A1-206ENST00000467045 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
COL21A1-206ENST00000467045 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
COL21A1-206ENST00000467045 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
COL21A1-206ENST00000467045 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
COL21A1-206ENST00000467045 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
COL21A1-206ENST00000467045 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
COL21A1-206ENST00000467045 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
COL21A1-206ENST00000467045 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
COL21A1-206ENST00000467045 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
COL21A1-206ENST00000467045 WDR62O43379 1518 aa19.98■□□□□ 0.79
COL21A1-206ENST00000467045 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
COL21A1-206ENST00000467045 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
COL21A1-206ENST00000467045 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
COL21A1-206ENST00000467045 CUX2O14529 1486 aa19.93■□□□□ 0.78
COL21A1-206ENST00000467045 CUX1P39880 1505 aa19.92■□□□□ 0.78
COL21A1-206ENST00000467045 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
COL21A1-206ENST00000467045 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
COL21A1-206ENST00000467045 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
COL21A1-206ENST00000467045 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
COL21A1-206ENST00000467045 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
COL21A1-206ENST00000467045 SOGA1O94964 1423 aa19.77■□□□□ 0.76
COL21A1-206ENST00000467045 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
COL21A1-206ENST00000467045 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
COL21A1-206ENST00000467045 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
COL21A1-206ENST00000467045 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
COL21A1-206ENST00000467045 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
COL21A1-206ENST00000467045 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
COL21A1-206ENST00000467045 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
COL21A1-206ENST00000467045 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
COL21A1-206ENST00000467045 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
COL21A1-206ENST00000467045 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
COL21A1-206ENST00000467045 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
COL21A1-206ENST00000467045 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
COL21A1-206ENST00000467045 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
COL21A1-206ENST00000467045 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
COL21A1-206ENST00000467045 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
COL21A1-206ENST00000467045 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
COL21A1-206ENST00000467045 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
COL21A1-206ENST00000467045 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
COL21A1-206ENST00000467045 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
COL21A1-206ENST00000467045 IGF1RP08069 1367 aa19.39■□□□□ 0.7
COL21A1-206ENST00000467045 FBLN2P98095 1184 aa19.39■□□□□ 0.69
COL21A1-206ENST00000467045 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
COL21A1-206ENST00000467045 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
COL21A1-206ENST00000467045 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
COL21A1-206ENST00000467045 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
COL21A1-206ENST00000467045 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
COL21A1-206ENST00000467045 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
COL21A1-206ENST00000467045 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
COL21A1-206ENST00000467045 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
COL21A1-206ENST00000467045 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
COL21A1-206ENST00000467045 EEA1Q15075 1411 aa19.26■□□□□ 0.67
COL21A1-206ENST00000467045 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
COL21A1-206ENST00000467045 CHD1O14646 1710 aa19.24■□□□□ 0.67
COL21A1-206ENST00000467045 CUL7Q14999 1698 aa19.22■□□□□ 0.67
COL21A1-206ENST00000467045 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
COL21A1-206ENST00000467045 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
COL21A1-206ENST00000467045 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
COL21A1-206ENST00000467045 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
COL21A1-206ENST00000467045 NUP160Q12769 1436 aa19.1■□□□□ 0.65
COL21A1-206ENST00000467045 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
COL21A1-206ENST00000467045 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
COL21A1-206ENST00000467045 CLASP1Q7Z460 1538 aa19.04■□□□□ 0.64
COL21A1-206ENST00000467045 KIF21BO75037 1637 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms