RNA–Protein interactions for RNA: ENST00000465998.1

TRNT1-209, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 4

Gene TRNT1, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-209ENST00000465998 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
TRNT1-209ENST00000465998 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
TRNT1-209ENST00000465998 NISCHQ9Y2I1 1504 aa24.8■■□□□ 1.56
TRNT1-209ENST00000465998 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
TRNT1-209ENST00000465998 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
TRNT1-209ENST00000465998 ABCC9O60706 1549 aa22.11■■□□□ 1.13
TRNT1-209ENST00000465998 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
TRNT1-209ENST00000465998 FOXD1Q16676 465 aa21.58■■□□□ 1.05
TRNT1-209ENST00000465998 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
TRNT1-209ENST00000465998 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
TRNT1-209ENST00000465998 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
TRNT1-209ENST00000465998 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
TRNT1-209ENST00000465998 NACADO15069 1562 aa20.71■□□□□ 0.91
TRNT1-209ENST00000465998 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TRNT1-209ENST00000465998 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
TRNT1-209ENST00000465998 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
TRNT1-209ENST00000465998 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRNT1-209ENST00000465998 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
TRNT1-209ENST00000465998 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
TRNT1-209ENST00000465998 MSH5O43196 834 aa20.28■□□□□ 0.84
TRNT1-209ENST00000465998 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
TRNT1-209ENST00000465998 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
TRNT1-209ENST00000465998 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
TRNT1-209ENST00000465998 ADRA2BP18089 450 aa20.07■□□□□ 0.8
TRNT1-209ENST00000465998 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
TRNT1-209ENST00000465998 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
TRNT1-209ENST00000465998 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
TRNT1-209ENST00000465998 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
TRNT1-209ENST00000465998 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
TRNT1-209ENST00000465998 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
TRNT1-209ENST00000465998 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
TRNT1-209ENST00000465998 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
TRNT1-209ENST00000465998 CUX2O14529 1486 aa19.14■□□□□ 0.65
TRNT1-209ENST00000465998 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
TRNT1-209ENST00000465998 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
TRNT1-209ENST00000465998 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
TRNT1-209ENST00000465998 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
TRNT1-209ENST00000465998 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
TRNT1-209ENST00000465998 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
TRNT1-209ENST00000465998 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
TRNT1-209ENST00000465998 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
TRNT1-209ENST00000465998 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
TRNT1-209ENST00000465998 NESP48681 1621 aa18.91■□□□□ 0.62
TRNT1-209ENST00000465998 WIZO95785 1651 aa18.87■□□□□ 0.61
TRNT1-209ENST00000465998 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
TRNT1-209ENST00000465998 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
TRNT1-209ENST00000465998 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
TRNT1-209ENST00000465998 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
TRNT1-209ENST00000465998 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
TRNT1-209ENST00000465998 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
TRNT1-209ENST00000465998 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
TRNT1-209ENST00000465998 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
TRNT1-209ENST00000465998 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
TRNT1-209ENST00000465998 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
TRNT1-209ENST00000465998 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
TRNT1-209ENST00000465998 WDR62O43379 1518 aa18.46■□□□□ 0.55
TRNT1-209ENST00000465998 CFTRP13569 1480 aa18.44■□□□□ 0.54
TRNT1-209ENST00000465998 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
TRNT1-209ENST00000465998 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
TRNT1-209ENST00000465998 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
TRNT1-209ENST00000465998 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
TRNT1-209ENST00000465998 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
TRNT1-209ENST00000465998 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
TRNT1-209ENST00000465998 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
TRNT1-209ENST00000465998 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
TRNT1-209ENST00000465998 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
TRNT1-209ENST00000465998 RIMBP3CA6NJZ7 1639 aa18.06■□□□□ 0.48
TRNT1-209ENST00000465998 RIMBP3BA6NNM3 1639 aa18.06■□□□□ 0.48
TRNT1-209ENST00000465998 RIMBP3Q9UFD9 1639 aa18.06■□□□□ 0.48
TRNT1-209ENST00000465998 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
TRNT1-209ENST00000465998 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
TRNT1-209ENST00000465998 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
TRNT1-209ENST00000465998 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
TRNT1-209ENST00000465998 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
TRNT1-209ENST00000465998 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
TRNT1-209ENST00000465998 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
TRNT1-209ENST00000465998 CUX1P39880 1505 aa17.92■□□□□ 0.46
TRNT1-209ENST00000465998 SOGA1O94964 1423 aa17.89■□□□□ 0.45
TRNT1-209ENST00000465998 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
TRNT1-209ENST00000465998 CHD1O14646 1710 aa17.88■□□□□ 0.45
TRNT1-209ENST00000465998 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
TRNT1-209ENST00000465998 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
TRNT1-209ENST00000465998 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
TRNT1-209ENST00000465998 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
TRNT1-209ENST00000465998 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
TRNT1-209ENST00000465998 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRNT1-209ENST00000465998 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
TRNT1-209ENST00000465998 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
TRNT1-209ENST00000465998 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
TRNT1-209ENST00000465998 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
TRNT1-209ENST00000465998 FBLN2P98095 1184 aa17.75■□□□□ 0.43
TRNT1-209ENST00000465998 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
TRNT1-209ENST00000465998 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
TRNT1-209ENST00000465998 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
TRNT1-209ENST00000465998 ABCA10Q8WWZ4 1543 aa17.7■□□□□ 0.42
TRNT1-209ENST00000465998 WDR97A6NE52 1622 aa17.67■□□□□ 0.42
TRNT1-209ENST00000465998 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
TRNT1-209ENST00000465998 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
TRNT1-209ENST00000465998 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
TRNT1-209ENST00000465998 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms