RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
ATPAF2-203ENST00000465337 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
ATPAF2-203ENST00000465337 ABCC9O60706 1549 aa26.93■■□□□ 1.9
ATPAF2-203ENST00000465337 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
ATPAF2-203ENST00000465337 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
ATPAF2-203ENST00000465337 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
ATPAF2-203ENST00000465337 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
ATPAF2-203ENST00000465337 NACADO15069 1562 aa26.27■■□□□ 1.8
ATPAF2-203ENST00000465337 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
ATPAF2-203ENST00000465337 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
ATPAF2-203ENST00000465337 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
ATPAF2-203ENST00000465337 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
ATPAF2-203ENST00000465337 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
ATPAF2-203ENST00000465337 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
ATPAF2-203ENST00000465337 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
ATPAF2-203ENST00000465337 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
ATPAF2-203ENST00000465337 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
ATPAF2-203ENST00000465337 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
ATPAF2-203ENST00000465337 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
ATPAF2-203ENST00000465337 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
ATPAF2-203ENST00000465337 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
ATPAF2-203ENST00000465337 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
ATPAF2-203ENST00000465337 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
ATPAF2-203ENST00000465337 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
ATPAF2-203ENST00000465337 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
ATPAF2-203ENST00000465337 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
ATPAF2-203ENST00000465337 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
ATPAF2-203ENST00000465337 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
ATPAF2-203ENST00000465337 WIZO95785 1651 aa23.95■■□□□ 1.42
ATPAF2-203ENST00000465337 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
ATPAF2-203ENST00000465337 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
ATPAF2-203ENST00000465337 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
ATPAF2-203ENST00000465337 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
ATPAF2-203ENST00000465337 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
ATPAF2-203ENST00000465337 CFTRP13569 1480 aa23.48■■□□□ 1.35
ATPAF2-203ENST00000465337 PDS5BQ9NTI5 1447 aa23.45■■□□□ 1.34
ATPAF2-203ENST00000465337 NESP48681 1621 aa23.36■■□□□ 1.33
ATPAF2-203ENST00000465337 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
ATPAF2-203ENST00000465337 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
ATPAF2-203ENST00000465337 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
ATPAF2-203ENST00000465337 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
ATPAF2-203ENST00000465337 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
ATPAF2-203ENST00000465337 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
ATPAF2-203ENST00000465337 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
ATPAF2-203ENST00000465337 CUX2O14529 1486 aa22.99■■□□□ 1.27
ATPAF2-203ENST00000465337 WDR62O43379 1518 aa22.94■■□□□ 1.26
ATPAF2-203ENST00000465337 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
ATPAF2-203ENST00000465337 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
ATPAF2-203ENST00000465337 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
ATPAF2-203ENST00000465337 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
ATPAF2-203ENST00000465337 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
ATPAF2-203ENST00000465337 CUX1P39880 1505 aa22.75■■□□□ 1.23
ATPAF2-203ENST00000465337 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
ATPAF2-203ENST00000465337 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
ATPAF2-203ENST00000465337 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-203ENST00000465337 SOGA1O94964 1423 aa22.69■■□□□ 1.22
ATPAF2-203ENST00000465337 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
ATPAF2-203ENST00000465337 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
ATPAF2-203ENST00000465337 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
ATPAF2-203ENST00000465337 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
ATPAF2-203ENST00000465337 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
ATPAF2-203ENST00000465337 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
ATPAF2-203ENST00000465337 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
ATPAF2-203ENST00000465337 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
ATPAF2-203ENST00000465337 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
ATPAF2-203ENST00000465337 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
ATPAF2-203ENST00000465337 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
ATPAF2-203ENST00000465337 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
ATPAF2-203ENST00000465337 KIF27Q86VH2 1401 aa22.41■■□□□ 1.18
ATPAF2-203ENST00000465337 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
ATPAF2-203ENST00000465337 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
ATPAF2-203ENST00000465337 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
ATPAF2-203ENST00000465337 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
ATPAF2-203ENST00000465337 ABCA5Q8WWZ7 1642 aa22.3■■□□□ 1.16
ATPAF2-203ENST00000465337 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
ATPAF2-203ENST00000465337 EEA1Q15075 1411 aa22.29■■□□□ 1.16
ATPAF2-203ENST00000465337 IGF1RP08069 1367 aa22.25■■□□□ 1.15
ATPAF2-203ENST00000465337 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
ATPAF2-203ENST00000465337 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
ATPAF2-203ENST00000465337 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
ATPAF2-203ENST00000465337 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
ATPAF2-203ENST00000465337 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
ATPAF2-203ENST00000465337 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
ATPAF2-203ENST00000465337 FBLN2P98095 1184 aa22.15■■□□□ 1.14
ATPAF2-203ENST00000465337 CARMIL1Q5VZK9 1371 aa22.14■■□□□ 1.14
ATPAF2-203ENST00000465337 PBRM1Q86U86 1689 aa22.12■■□□□ 1.13
ATPAF2-203ENST00000465337 CUL7Q14999 1698 aa22.09■■□□□ 1.13
ATPAF2-203ENST00000465337 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
ATPAF2-203ENST00000465337 ADAMTS12P58397 1594 aa22.06■■□□□ 1.12
ATPAF2-203ENST00000465337 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
ATPAF2-203ENST00000465337 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
ATPAF2-203ENST00000465337 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
ATPAF2-203ENST00000465337 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
ATPAF2-203ENST00000465337 NUP160Q12769 1436 aa21.96■■□□□ 1.11
ATPAF2-203ENST00000465337 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
ATPAF2-203ENST00000465337 CHD1O14646 1710 aa21.9■■□□□ 1.1
ATPAF2-203ENST00000465337 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.09
ATPAF2-203ENST00000465337 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
ATPAF2-203ENST00000465337 KIF21BO75037 1637 aa21.83■■□□□ 1.08
ATPAF2-203ENST00000465337 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms