RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 NISCHQ9Y2I1 1504 aa32.02■■■□□ 2.72
TSPAN1-202ENST00000464786 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
TSPAN1-202ENST00000464786 ABCC9O60706 1549 aa27.6■■■□□ 2.01
TSPAN1-202ENST00000464786 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
TSPAN1-202ENST00000464786 NACADO15069 1562 aa26.68■■□□□ 1.86
TSPAN1-202ENST00000464786 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
TSPAN1-202ENST00000464786 RB1CC1Q8TDY2 1594 aa26.65■■□□□ 1.86
TSPAN1-202ENST00000464786 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
TSPAN1-202ENST00000464786 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
TSPAN1-202ENST00000464786 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
TSPAN1-202ENST00000464786 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
TSPAN1-202ENST00000464786 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
TSPAN1-202ENST00000464786 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
TSPAN1-202ENST00000464786 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
TSPAN1-202ENST00000464786 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
TSPAN1-202ENST00000464786 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
TSPAN1-202ENST00000464786 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.58
TSPAN1-202ENST00000464786 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
TSPAN1-202ENST00000464786 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
TSPAN1-202ENST00000464786 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
TSPAN1-202ENST00000464786 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
TSPAN1-202ENST00000464786 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
TSPAN1-202ENST00000464786 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
TSPAN1-202ENST00000464786 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
TSPAN1-202ENST00000464786 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
TSPAN1-202ENST00000464786 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
TSPAN1-202ENST00000464786 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
TSPAN1-202ENST00000464786 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
TSPAN1-202ENST00000464786 WIZO95785 1651 aa24.34■■□□□ 1.49
TSPAN1-202ENST00000464786 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
TSPAN1-202ENST00000464786 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
TSPAN1-202ENST00000464786 CADPSQ9ULU8 1353 aa23.96■■□□□ 1.43
TSPAN1-202ENST00000464786 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
TSPAN1-202ENST00000464786 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
TSPAN1-202ENST00000464786 NESP48681 1621 aa23.9■■□□□ 1.42
TSPAN1-202ENST00000464786 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
TSPAN1-202ENST00000464786 ERCC6Q03468 1493 aa23.82■■□□□ 1.4
TSPAN1-202ENST00000464786 CFTRP13569 1480 aa23.81■■□□□ 1.4
TSPAN1-202ENST00000464786 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
TSPAN1-202ENST00000464786 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
TSPAN1-202ENST00000464786 KIF21AQ7Z4S6 1674 aa23.56■■□□□ 1.36
TSPAN1-202ENST00000464786 CUX2O14529 1486 aa23.52■■□□□ 1.36
TSPAN1-202ENST00000464786 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
TSPAN1-202ENST00000464786 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
TSPAN1-202ENST00000464786 THOC2Q8NI27 1593 aaKnown RBP23.45■■□□□ 1.34
TSPAN1-202ENST00000464786 WDR62O43379 1518 aa23.38■■□□□ 1.33
TSPAN1-202ENST00000464786 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
TSPAN1-202ENST00000464786 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
TSPAN1-202ENST00000464786 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
TSPAN1-202ENST00000464786 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
TSPAN1-202ENST00000464786 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
TSPAN1-202ENST00000464786 CUX1P39880 1505 aa23.1■■□□□ 1.29
TSPAN1-202ENST00000464786 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
TSPAN1-202ENST00000464786 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
TSPAN1-202ENST00000464786 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
TSPAN1-202ENST00000464786 SOGA1O94964 1423 aa23.05■■□□□ 1.28
TSPAN1-202ENST00000464786 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
TSPAN1-202ENST00000464786 TOP2BQ02880 1626 aa22.96■■□□□ 1.27
TSPAN1-202ENST00000464786 RAD54L2Q9Y4B4 1467 aa22.95■■□□□ 1.26
TSPAN1-202ENST00000464786 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
TSPAN1-202ENST00000464786 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
TSPAN1-202ENST00000464786 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
TSPAN1-202ENST00000464786 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
TSPAN1-202ENST00000464786 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
TSPAN1-202ENST00000464786 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
TSPAN1-202ENST00000464786 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
TSPAN1-202ENST00000464786 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
TSPAN1-202ENST00000464786 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
TSPAN1-202ENST00000464786 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
TSPAN1-202ENST00000464786 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
TSPAN1-202ENST00000464786 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
TSPAN1-202ENST00000464786 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
TSPAN1-202ENST00000464786 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
TSPAN1-202ENST00000464786 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
TSPAN1-202ENST00000464786 FBLN2P98095 1184 aa22.63■■□□□ 1.21
TSPAN1-202ENST00000464786 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
TSPAN1-202ENST00000464786 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
TSPAN1-202ENST00000464786 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
TSPAN1-202ENST00000464786 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
TSPAN1-202ENST00000464786 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
TSPAN1-202ENST00000464786 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
TSPAN1-202ENST00000464786 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
TSPAN1-202ENST00000464786 IGF1RP08069 1367 aa22.53■■□□□ 1.2
TSPAN1-202ENST00000464786 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
TSPAN1-202ENST00000464786 CHD1O14646 1710 aa22.44■■□□□ 1.18
TSPAN1-202ENST00000464786 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
TSPAN1-202ENST00000464786 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
TSPAN1-202ENST00000464786 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
TSPAN1-202ENST00000464786 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
TSPAN1-202ENST00000464786 CUL7Q14999 1698 aa22.36■■□□□ 1.17
TSPAN1-202ENST00000464786 EEA1Q15075 1411 aa22.33■■□□□ 1.17
TSPAN1-202ENST00000464786 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
TSPAN1-202ENST00000464786 NUP160Q12769 1436 aa22.31■■□□□ 1.16
TSPAN1-202ENST00000464786 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
TSPAN1-202ENST00000464786 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
TSPAN1-202ENST00000464786 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
TSPAN1-202ENST00000464786 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
TSPAN1-202ENST00000464786 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
TSPAN1-202ENST00000464786 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
TSPAN1-202ENST00000464786 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms