RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
PITRM1-209ENST00000464395 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
PITRM1-209ENST00000464395 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
PITRM1-209ENST00000464395 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
PITRM1-209ENST00000464395 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
PITRM1-209ENST00000464395 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
PITRM1-209ENST00000464395 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
PITRM1-209ENST00000464395 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
PITRM1-209ENST00000464395 ABCC9O60706 1549 aa18.92■□□□□ 0.62
PITRM1-209ENST00000464395 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
PITRM1-209ENST00000464395 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
PITRM1-209ENST00000464395 NACADO15069 1562 aa18.73■□□□□ 0.59
PITRM1-209ENST00000464395 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
PITRM1-209ENST00000464395 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
PITRM1-209ENST00000464395 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
PITRM1-209ENST00000464395 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
PITRM1-209ENST00000464395 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
PITRM1-209ENST00000464395 WIZO95785 1651 aa18.3■□□□□ 0.52
PITRM1-209ENST00000464395 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
PITRM1-209ENST00000464395 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
PITRM1-209ENST00000464395 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
PITRM1-209ENST00000464395 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
PITRM1-209ENST00000464395 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
PITRM1-209ENST00000464395 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
PITRM1-209ENST00000464395 HRCP23327 699 aa17.97■□□□□ 0.47
PITRM1-209ENST00000464395 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
PITRM1-209ENST00000464395 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
PITRM1-209ENST00000464395 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
PITRM1-209ENST00000464395 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
PITRM1-209ENST00000464395 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
PITRM1-209ENST00000464395 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
PITRM1-209ENST00000464395 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
PITRM1-209ENST00000464395 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
PITRM1-209ENST00000464395 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
PITRM1-209ENST00000464395 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
PITRM1-209ENST00000464395 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
PITRM1-209ENST00000464395 SOGA1O94964 1423 aa17.51■□□□□ 0.39
PITRM1-209ENST00000464395 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
PITRM1-209ENST00000464395 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
PITRM1-209ENST00000464395 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
PITRM1-209ENST00000464395 EEA1Q15075 1411 aa17.44■□□□□ 0.38
PITRM1-209ENST00000464395 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
PITRM1-209ENST00000464395 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
PITRM1-209ENST00000464395 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
PITRM1-209ENST00000464395 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
PITRM1-209ENST00000464395 KIF21BO75037 1637 aa17.35■□□□□ 0.37
PITRM1-209ENST00000464395 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
PITRM1-209ENST00000464395 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
PITRM1-209ENST00000464395 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
PITRM1-209ENST00000464395 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
PITRM1-209ENST00000464395 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
PITRM1-209ENST00000464395 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
PITRM1-209ENST00000464395 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
PITRM1-209ENST00000464395 PRDM2Q13029 1718 aa17.21■□□□□ 0.34
PITRM1-209ENST00000464395 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
PITRM1-209ENST00000464395 CUX1P39880 1505 aa17.13■□□□□ 0.33
PITRM1-209ENST00000464395 CFTRP13569 1480 aa17.12■□□□□ 0.33
PITRM1-209ENST00000464395 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
PITRM1-209ENST00000464395 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
PITRM1-209ENST00000464395 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
PITRM1-209ENST00000464395 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
PITRM1-209ENST00000464395 CLIP1P30622 1438 aa17■□□□□ 0.31
PITRM1-209ENST00000464395 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
PITRM1-209ENST00000464395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
PITRM1-209ENST00000464395 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
PITRM1-209ENST00000464395 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
PITRM1-209ENST00000464395 KIF27Q86VH2 1401 aa16.85■□□□□ 0.29
PITRM1-209ENST00000464395 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
PITRM1-209ENST00000464395 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
PITRM1-209ENST00000464395 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
PITRM1-209ENST00000464395 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.27
PITRM1-209ENST00000464395 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
PITRM1-209ENST00000464395 IGF1RP08069 1367 aa16.76■□□□□ 0.27
PITRM1-209ENST00000464395 CUX2O14529 1486 aa16.71■□□□□ 0.27
PITRM1-209ENST00000464395 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
PITRM1-209ENST00000464395 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
PITRM1-209ENST00000464395 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
PITRM1-209ENST00000464395 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
PITRM1-209ENST00000464395 MAP3K1Q13233 1512 aa16.64■□□□□ 0.25
PITRM1-209ENST00000464395 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
PITRM1-209ENST00000464395 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
PITRM1-209ENST00000464395 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
PITRM1-209ENST00000464395 NESP48681 1621 aa16.62■□□□□ 0.25
PITRM1-209ENST00000464395 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
PITRM1-209ENST00000464395 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
PITRM1-209ENST00000464395 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
PITRM1-209ENST00000464395 TIAM1Q13009 1591 aa16.59■□□□□ 0.25
PITRM1-209ENST00000464395 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
PITRM1-209ENST00000464395 CUL7Q14999 1698 aa16.57■□□□□ 0.24
PITRM1-209ENST00000464395 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
PITRM1-209ENST00000464395 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
PITRM1-209ENST00000464395 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
PITRM1-209ENST00000464395 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
PITRM1-209ENST00000464395 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
PITRM1-209ENST00000464395 ABCA5Q8WWZ7 1642 aa16.54■□□□□ 0.24
PITRM1-209ENST00000464395 APLP2Q06481 763 aa16.51■□□□□ 0.23
PITRM1-209ENST00000464395 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
PITRM1-209ENST00000464395 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
PITRM1-209ENST00000464395 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
PITRM1-209ENST00000464395 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms