RNA–Protein interactions for RNA: ENST00000463509.1

RBFOX2-211, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 2

Gene RBFOX2, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-211ENST00000463509 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
RBFOX2-211ENST00000463509 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
RBFOX2-211ENST00000463509 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
RBFOX2-211ENST00000463509 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.09
RBFOX2-211ENST00000463509 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
RBFOX2-211ENST00000463509 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
RBFOX2-211ENST00000463509 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
RBFOX2-211ENST00000463509 ABCC9O60706 1549 aa15.27■□□□□ 0.04
RBFOX2-211ENST00000463509 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
RBFOX2-211ENST00000463509 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
RBFOX2-211ENST00000463509 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
RBFOX2-211ENST00000463509 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
RBFOX2-211ENST00000463509 NACADO15069 1562 aa14.89□□□□□ -0.03
RBFOX2-211ENST00000463509 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
RBFOX2-211ENST00000463509 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
RBFOX2-211ENST00000463509 BICRAQ9NZM4 1560 aa14.45□□□□□ -0.1
RBFOX2-211ENST00000463509 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
RBFOX2-211ENST00000463509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
RBFOX2-211ENST00000463509 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
RBFOX2-211ENST00000463509 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
RBFOX2-211ENST00000463509 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
RBFOX2-211ENST00000463509 HRCP23327 699 aa14.37□□□□□ -0.11
RBFOX2-211ENST00000463509 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
RBFOX2-211ENST00000463509 WIZO95785 1651 aa14.27□□□□□ -0.13
RBFOX2-211ENST00000463509 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
RBFOX2-211ENST00000463509 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
RBFOX2-211ENST00000463509 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
RBFOX2-211ENST00000463509 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
RBFOX2-211ENST00000463509 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
RBFOX2-211ENST00000463509 TRIM26Q12899 539 aaPredicted RBP14.09□□□□□ -0.15
RBFOX2-211ENST00000463509 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
RBFOX2-211ENST00000463509 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
RBFOX2-211ENST00000463509 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
RBFOX2-211ENST00000463509 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
RBFOX2-211ENST00000463509 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
RBFOX2-211ENST00000463509 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
RBFOX2-211ENST00000463509 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
RBFOX2-211ENST00000463509 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
RBFOX2-211ENST00000463509 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
RBFOX2-211ENST00000463509 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
RBFOX2-211ENST00000463509 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
RBFOX2-211ENST00000463509 HMGXB3Q12766 1538 aa13.76□□□□□ -0.21
RBFOX2-211ENST00000463509 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
RBFOX2-211ENST00000463509 SOGA1O94964 1423 aa13.65□□□□□ -0.22
RBFOX2-211ENST00000463509 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
RBFOX2-211ENST00000463509 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
RBFOX2-211ENST00000463509 CEP162Q5TB80 1403 aa13.59□□□□□ -0.23
RBFOX2-211ENST00000463509 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
RBFOX2-211ENST00000463509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
RBFOX2-211ENST00000463509 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
RBFOX2-211ENST00000463509 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
RBFOX2-211ENST00000463509 EEA1Q15075 1411 aa13.56□□□□□ -0.24
RBFOX2-211ENST00000463509 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
RBFOX2-211ENST00000463509 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
RBFOX2-211ENST00000463509 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
RBFOX2-211ENST00000463509 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
RBFOX2-211ENST00000463509 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.24
RBFOX2-211ENST00000463509 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
RBFOX2-211ENST00000463509 GOLGA3Q08378 1498 aa13.49□□□□□ -0.25
RBFOX2-211ENST00000463509 CFTRP13569 1480 aa13.48□□□□□ -0.25
RBFOX2-211ENST00000463509 NESP48681 1621 aa13.45□□□□□ -0.26
RBFOX2-211ENST00000463509 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
RBFOX2-211ENST00000463509 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
RBFOX2-211ENST00000463509 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
RBFOX2-211ENST00000463509 KIF21BO75037 1637 aa13.39□□□□□ -0.27
RBFOX2-211ENST00000463509 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
RBFOX2-211ENST00000463509 CUX1P39880 1505 aa13.38□□□□□ -0.27
RBFOX2-211ENST00000463509 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-211ENST00000463509 CLIP1P30622 1438 aa13.34□□□□□ -0.27
RBFOX2-211ENST00000463509 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
RBFOX2-211ENST00000463509 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.28
RBFOX2-211ENST00000463509 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
RBFOX2-211ENST00000463509 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
RBFOX2-211ENST00000463509 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
RBFOX2-211ENST00000463509 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.28
RBFOX2-211ENST00000463509 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
RBFOX2-211ENST00000463509 APLP2Q06481 763 aa13.25□□□□□ -0.29
RBFOX2-211ENST00000463509 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
RBFOX2-211ENST00000463509 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
RBFOX2-211ENST00000463509 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
RBFOX2-211ENST00000463509 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
RBFOX2-211ENST00000463509 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
RBFOX2-211ENST00000463509 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
RBFOX2-211ENST00000463509 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
RBFOX2-211ENST00000463509 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
RBFOX2-211ENST00000463509 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
RBFOX2-211ENST00000463509 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
RBFOX2-211ENST00000463509 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
RBFOX2-211ENST00000463509 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
RBFOX2-211ENST00000463509 CUX2O14529 1486 aa13.12□□□□□ -0.31
RBFOX2-211ENST00000463509 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
RBFOX2-211ENST00000463509 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-211ENST00000463509 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
RBFOX2-211ENST00000463509 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
RBFOX2-211ENST00000463509 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
RBFOX2-211ENST00000463509 CENPBP07199 599 aaPredicted RBP13.06□□□□□ -0.32
RBFOX2-211ENST00000463509 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
RBFOX2-211ENST00000463509 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
RBFOX2-211ENST00000463509 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
RBFOX2-211ENST00000463509 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms