RNA–Protein interactions for RNA: ENST00000463120.2

FMR1-209, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-209ENST00000463120 NISCHQ9Y2I1 1504 aa45.78■■■■■ 4.92
FMR1-209ENST00000463120 CCDC180Q9P1Z9 1646 aa40.62■■■■■ 4.09
FMR1-209ENST00000463120 ABCC9O60706 1549 aa39.44■■■■□ 3.9
FMR1-209ENST00000463120 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
FMR1-209ENST00000463120 NACADO15069 1562 aa38.15■■■■□ 3.7
FMR1-209ENST00000463120 RB1CC1Q8TDY2 1594 aa38.11■■■■□ 3.69
FMR1-209ENST00000463120 DCAF8L2P0C7V8 631 aa38.06■■■■□ 3.68
FMR1-209ENST00000463120 MYO15BQ96JP2 1530 aa38.06■■■■□ 3.68
FMR1-209ENST00000463120 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
FMR1-209ENST00000463120 UNC13AQ9UPW8 1703 aa37.15■■■■□ 3.54
FMR1-209ENST00000463120 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
FMR1-209ENST00000463120 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
FMR1-209ENST00000463120 PABPN1Q86U42 306 aaKnown RBP eCLIP36.88■■■■□ 3.49
FMR1-209ENST00000463120 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
FMR1-209ENST00000463120 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
FMR1-209ENST00000463120 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
FMR1-209ENST00000463120 CC2D2AQ9P2K1 1620 aa35.71■■■■□ 3.31
FMR1-209ENST00000463120 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
FMR1-209ENST00000463120 BAZ1AQ9NRL2 1556 aaPredicted RBP35.49■■■■□ 3.27
FMR1-209ENST00000463120 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
FMR1-209ENST00000463120 MROH2BQ7Z745 1585 aa35.25■■■■□ 3.23
FMR1-209ENST00000463120 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
FMR1-209ENST00000463120 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
FMR1-209ENST00000463120 NCAPD3P42695 1498 aa35.21■■■■□ 3.23
FMR1-209ENST00000463120 PEG3Q9GZU2 1588 aa35.17■■■■□ 3.22
FMR1-209ENST00000463120 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
FMR1-209ENST00000463120 RSF1Q96T23 1441 aaPredicted RBP34.96■■■■□ 3.19
FMR1-209ENST00000463120 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
FMR1-209ENST00000463120 WIZO95785 1651 aa34.86■■■■□ 3.17
FMR1-209ENST00000463120 TOP2AP11388 1531 aaKnown RBP34.56■■■■□ 3.12
FMR1-209ENST00000463120 LAMC3Q9Y6N6 1575 aa34.22■■■■□ 3.07
FMR1-209ENST00000463120 NESP48681 1621 aa34.19■■■■□ 3.06
FMR1-209ENST00000463120 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
FMR1-209ENST00000463120 SUPT5HO00267 1087 aaKnown RBP34.16■■■■□ 3.06
FMR1-209ENST00000463120 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
FMR1-209ENST00000463120 CFTRP13569 1480 aa34.03■■■■□ 3.04
FMR1-209ENST00000463120 ERCC6Q03468 1493 aa34.01■■■■□ 3.04
FMR1-209ENST00000463120 PDS5BQ9NTI5 1447 aa34■■■■□ 3.03
FMR1-209ENST00000463120 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
FMR1-209ENST00000463120 FANCD2Q9BXW9 1451 aa33.76■■■□□ 2.99
FMR1-209ENST00000463120 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
FMR1-209ENST00000463120 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.99
FMR1-209ENST00000463120 THOC2Q8NI27 1593 aaKnown RBP33.66■■■□□ 2.98
FMR1-209ENST00000463120 CUX2O14529 1486 aa33.63■■■□□ 2.97
FMR1-209ENST00000463120 MRC2Q9UBG0 1479 aa33.61■■■□□ 2.97
FMR1-209ENST00000463120 WDR62O43379 1518 aa33.5■■■□□ 2.95
FMR1-209ENST00000463120 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
FMR1-209ENST00000463120 ABCC8Q09428 1581 aa33.32■■■□□ 2.92
FMR1-209ENST00000463120 TOPBP1Q92547 1522 aa33.24■■■□□ 2.91
FMR1-209ENST00000463120 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
FMR1-209ENST00000463120 CUX1P39880 1505 aa33.06■■■□□ 2.88
FMR1-209ENST00000463120 IFT140Q96RY7 1462 aa33.01■■■□□ 2.88
FMR1-209ENST00000463120 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
FMR1-209ENST00000463120 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
FMR1-209ENST00000463120 FGD5Q6ZNL6 1462 aa32.92■■■□□ 2.86
FMR1-209ENST00000463120 TOP2BQ02880 1626 aa32.87■■■□□ 2.85
FMR1-209ENST00000463120 SOGA1O94964 1423 aa32.85■■■□□ 2.85
FMR1-209ENST00000463120 TARBP1Q13395 1621 aaKnown RBP32.85■■■□□ 2.85
FMR1-209ENST00000463120 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
FMR1-209ENST00000463120 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
FMR1-209ENST00000463120 RAD54L2Q9Y4B4 1467 aa32.79■■■□□ 2.84
FMR1-209ENST00000463120 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
FMR1-209ENST00000463120 WDR97A6NE52 1622 aa32.69■■■□□ 2.82
FMR1-209ENST00000463120 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
FMR1-209ENST00000463120 ABCA10Q8WWZ4 1543 aa32.66■■■□□ 2.82
FMR1-209ENST00000463120 AQRO60306 1485 aaKnown RBP eCLIP32.63■■■□□ 2.817e-6■■□□□ 12.2
FMR1-209ENST00000463120 TDRD9Q8NDG6 1382 aaKnown RBP32.6■■■□□ 2.81
FMR1-209ENST00000463120 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
FMR1-209ENST00000463120 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
FMR1-209ENST00000463120 GRIN2BQ13224 1484 aa32.46■■■□□ 2.79
FMR1-209ENST00000463120 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
FMR1-209ENST00000463120 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
FMR1-209ENST00000463120 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
FMR1-209ENST00000463120 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
FMR1-209ENST00000463120 DNAJC5Q9H3Z4 198 aa32.29■■■□□ 2.76
FMR1-209ENST00000463120 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
FMR1-209ENST00000463120 ERICH3Q5RHP9 1530 aa32.27■■■□□ 2.76
FMR1-209ENST00000463120 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
FMR1-209ENST00000463120 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
FMR1-209ENST00000463120 CHD1O14646 1710 aa32.17■■■□□ 2.74
FMR1-209ENST00000463120 FBLN2P98095 1184 aa32.16■■■□□ 2.74
FMR1-209ENST00000463120 CHMP7Q8WUX9 453 aaPredicted RBP32.16■■■□□ 2.74
FMR1-209ENST00000463120 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
FMR1-209ENST00000463120 FHAD1B1AJZ9 1412 aa32.13■■■□□ 2.73
FMR1-209ENST00000463120 IGF1RP08069 1367 aa32.1■■■□□ 2.73
FMR1-209ENST00000463120 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
FMR1-209ENST00000463120 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
FMR1-209ENST00000463120 CUL7Q14999 1698 aa32.01■■■□□ 2.71
FMR1-209ENST00000463120 RUSC2Q8N2Y8 1516 aa31.96■■■□□ 2.71
FMR1-209ENST00000463120 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
FMR1-209ENST00000463120 NUP160Q12769 1436 aa31.9■■■□□ 2.7
FMR1-209ENST00000463120 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
FMR1-209ENST00000463120 EEA1Q15075 1411 aa31.85■■■□□ 2.69
FMR1-209ENST00000463120 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
FMR1-209ENST00000463120 RAPGEF2Q9Y4G8 1499 aa31.76■■■□□ 2.67
FMR1-209ENST00000463120 CSRNP3Q8WYN3 585 aa31.72■■■□□ 2.67
FMR1-209ENST00000463120 PRXQ9BXM0 1461 aa31.72■■■□□ 2.67
FMR1-209ENST00000463120 ARHGEF11O15085 1522 aa31.7■■■□□ 2.67
FMR1-209ENST00000463120 KIAA0586Q9BVV6 1533 aa31.65■■■□□ 2.66
FMR1-209ENST00000463120 RIMBP3CA6NJZ7 1639 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms