RNA–Protein interactions for RNA: ENST00000462997.5

POLR3F-203, Transcript of RNA polymerase III subunit F, humanhuman

TSL 1 (best)

Gene POLR3F, Length 2,257 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3F-203ENST00000462997 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
POLR3F-203ENST00000462997 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
POLR3F-203ENST00000462997 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
POLR3F-203ENST00000462997 ABCC9O60706 1549 aa19.08■□□□□ 0.64
POLR3F-203ENST00000462997 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
POLR3F-203ENST00000462997 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
POLR3F-203ENST00000462997 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
POLR3F-203ENST00000462997 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
POLR3F-203ENST00000462997 NACADO15069 1562 aa18.74■□□□□ 0.59
POLR3F-203ENST00000462997 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
POLR3F-203ENST00000462997 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
POLR3F-203ENST00000462997 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
POLR3F-203ENST00000462997 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
POLR3F-203ENST00000462997 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
POLR3F-203ENST00000462997 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
POLR3F-203ENST00000462997 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
POLR3F-203ENST00000462997 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
POLR3F-203ENST00000462997 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
POLR3F-203ENST00000462997 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
POLR3F-203ENST00000462997 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.42
POLR3F-203ENST00000462997 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
POLR3F-203ENST00000462997 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
POLR3F-203ENST00000462997 WIZO95785 1651 aa17.47■□□□□ 0.39
POLR3F-203ENST00000462997 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
POLR3F-203ENST00000462997 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
POLR3F-203ENST00000462997 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
POLR3F-203ENST00000462997 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
POLR3F-203ENST00000462997 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
POLR3F-203ENST00000462997 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
POLR3F-203ENST00000462997 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
POLR3F-203ENST00000462997 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
POLR3F-203ENST00000462997 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
POLR3F-203ENST00000462997 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
POLR3F-203ENST00000462997 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
POLR3F-203ENST00000462997 HRCP23327 699 aa17.16■□□□□ 0.34
POLR3F-203ENST00000462997 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
POLR3F-203ENST00000462997 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
POLR3F-203ENST00000462997 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
POLR3F-203ENST00000462997 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
POLR3F-203ENST00000462997 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
POLR3F-203ENST00000462997 CFTRP13569 1480 aa16.84■□□□□ 0.29
POLR3F-203ENST00000462997 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
POLR3F-203ENST00000462997 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.28
POLR3F-203ENST00000462997 EEA1Q15075 1411 aa16.77■□□□□ 0.28
POLR3F-203ENST00000462997 SOGA1O94964 1423 aa16.75■□□□□ 0.27
POLR3F-203ENST00000462997 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
POLR3F-203ENST00000462997 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
POLR3F-203ENST00000462997 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
POLR3F-203ENST00000462997 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
POLR3F-203ENST00000462997 NESP48681 1621 aa16.68■□□□□ 0.26
POLR3F-203ENST00000462997 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
POLR3F-203ENST00000462997 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
POLR3F-203ENST00000462997 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
POLR3F-203ENST00000462997 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
POLR3F-203ENST00000462997 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
POLR3F-203ENST00000462997 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
POLR3F-203ENST00000462997 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
POLR3F-203ENST00000462997 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
POLR3F-203ENST00000462997 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
POLR3F-203ENST00000462997 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
POLR3F-203ENST00000462997 KIF21BO75037 1637 aa16.53■□□□□ 0.24
POLR3F-203ENST00000462997 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
POLR3F-203ENST00000462997 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.23
POLR3F-203ENST00000462997 CUX1P39880 1505 aa16.51■□□□□ 0.23
POLR3F-203ENST00000462997 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
POLR3F-203ENST00000462997 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
POLR3F-203ENST00000462997 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
POLR3F-203ENST00000462997 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
POLR3F-203ENST00000462997 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
POLR3F-203ENST00000462997 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
POLR3F-203ENST00000462997 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
POLR3F-203ENST00000462997 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
POLR3F-203ENST00000462997 FGD5Q6ZNL6 1462 aa16.36■□□□□ 0.21
POLR3F-203ENST00000462997 CLIP1P30622 1438 aa16.36■□□□□ 0.21
POLR3F-203ENST00000462997 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
POLR3F-203ENST00000462997 WDR62O43379 1518 aa16.32■□□□□ 0.2
POLR3F-203ENST00000462997 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
POLR3F-203ENST00000462997 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
POLR3F-203ENST00000462997 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
POLR3F-203ENST00000462997 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
POLR3F-203ENST00000462997 TTBK1Q5TCY1 1321 aaPredicted RBP16.29■□□□□ 0.2
POLR3F-203ENST00000462997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
POLR3F-203ENST00000462997 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
POLR3F-203ENST00000462997 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
POLR3F-203ENST00000462997 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
POLR3F-203ENST00000462997 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
POLR3F-203ENST00000462997 CUX2O14529 1486 aa16.22■□□□□ 0.19
POLR3F-203ENST00000462997 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
POLR3F-203ENST00000462997 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
POLR3F-203ENST00000462997 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
POLR3F-203ENST00000462997 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
POLR3F-203ENST00000462997 APLP2Q06481 763 aa16.13■□□□□ 0.17
POLR3F-203ENST00000462997 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
POLR3F-203ENST00000462997 IGF1RP08069 1367 aa16.11■□□□□ 0.17
POLR3F-203ENST00000462997 TDRD9Q8NDG6 1382 aaKnown RBP16.1■□□□□ 0.17
POLR3F-203ENST00000462997 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
POLR3F-203ENST00000462997 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
POLR3F-203ENST00000462997 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
POLR3F-203ENST00000462997 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
POLR3F-203ENST00000462997 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms