RNA–Protein interactions for RNA: ENST00000462810.1

SNRK-205, Transcript of SNF related kinase, humanhuman

TSL 2

Gene SNRK, Length 1,903 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-205ENST00000462810 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
SNRK-205ENST00000462810 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
SNRK-205ENST00000462810 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
SNRK-205ENST00000462810 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
SNRK-205ENST00000462810 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
SNRK-205ENST00000462810 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.51
SNRK-205ENST00000462810 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
SNRK-205ENST00000462810 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
SNRK-205ENST00000462810 NACADO15069 1562 aa23.71■■□□□ 1.39
SNRK-205ENST00000462810 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
SNRK-205ENST00000462810 ABCC9O60706 1549 aa23.65■■□□□ 1.38
SNRK-205ENST00000462810 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
SNRK-205ENST00000462810 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
SNRK-205ENST00000462810 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
SNRK-205ENST00000462810 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
SNRK-205ENST00000462810 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
SNRK-205ENST00000462810 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
SNRK-205ENST00000462810 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
SNRK-205ENST00000462810 WIZO95785 1651 aa22.87■■□□□ 1.25
SNRK-205ENST00000462810 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
SNRK-205ENST00000462810 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
SNRK-205ENST00000462810 LOC105371045A0A1W2PR82 267 aa22.65■■□□□ 1.22
SNRK-205ENST00000462810 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.22
SNRK-205ENST00000462810 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
SNRK-205ENST00000462810 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
SNRK-205ENST00000462810 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNRK-205ENST00000462810 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
SNRK-205ENST00000462810 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
SNRK-205ENST00000462810 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
SNRK-205ENST00000462810 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
SNRK-205ENST00000462810 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
SNRK-205ENST00000462810 HRCP23327 699 aa22.29■■□□□ 1.16
SNRK-205ENST00000462810 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
SNRK-205ENST00000462810 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
SNRK-205ENST00000462810 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
SNRK-205ENST00000462810 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
SNRK-205ENST00000462810 EEA1Q15075 1411 aa22.05■■□□□ 1.12
SNRK-205ENST00000462810 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
SNRK-205ENST00000462810 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
SNRK-205ENST00000462810 SOGA1O94964 1423 aa21.91■■□□□ 1.1
SNRK-205ENST00000462810 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
SNRK-205ENST00000462810 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
SNRK-205ENST00000462810 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
SNRK-205ENST00000462810 SYNJ1O43426 1573 aa21.83■■□□□ 1.08
SNRK-205ENST00000462810 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.08
SNRK-205ENST00000462810 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
SNRK-205ENST00000462810 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
SNRK-205ENST00000462810 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
SNRK-205ENST00000462810 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
SNRK-205ENST00000462810 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
SNRK-205ENST00000462810 KIF21BO75037 1637 aa21.7■■□□□ 1.06
SNRK-205ENST00000462810 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
SNRK-205ENST00000462810 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
SNRK-205ENST00000462810 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
SNRK-205ENST00000462810 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
SNRK-205ENST00000462810 CFTRP13569 1480 aa21.58■■□□□ 1.04
SNRK-205ENST00000462810 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
SNRK-205ENST00000462810 CUX1P39880 1505 aa21.46■■□□□ 1.03
SNRK-205ENST00000462810 CLIP1P30622 1438 aa21.44■■□□□ 1.02
SNRK-205ENST00000462810 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
SNRK-205ENST00000462810 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
SNRK-205ENST00000462810 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
SNRK-205ENST00000462810 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
SNRK-205ENST00000462810 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
SNRK-205ENST00000462810 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
SNRK-205ENST00000462810 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
SNRK-205ENST00000462810 APLP2Q06481 763 aa21.26■□□□□ 0.99
SNRK-205ENST00000462810 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
SNRK-205ENST00000462810 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
SNRK-205ENST00000462810 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
SNRK-205ENST00000462810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
SNRK-205ENST00000462810 CUX2O14529 1486 aa21.15■□□□□ 0.98
SNRK-205ENST00000462810 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
SNRK-205ENST00000462810 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
SNRK-205ENST00000462810 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
SNRK-205ENST00000462810 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
SNRK-205ENST00000462810 IGF1RP08069 1367 aa21.08■□□□□ 0.97
SNRK-205ENST00000462810 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.96
SNRK-205ENST00000462810 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
SNRK-205ENST00000462810 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.95
SNRK-205ENST00000462810 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
SNRK-205ENST00000462810 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
SNRK-205ENST00000462810 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
SNRK-205ENST00000462810 NESP48681 1621 aa20.95■□□□□ 0.94
SNRK-205ENST00000462810 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
SNRK-205ENST00000462810 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
SNRK-205ENST00000462810 CUL7Q14999 1698 aa20.89■□□□□ 0.93
SNRK-205ENST00000462810 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
SNRK-205ENST00000462810 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
SNRK-205ENST00000462810 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
SNRK-205ENST00000462810 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.93
SNRK-205ENST00000462810 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
SNRK-205ENST00000462810 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
SNRK-205ENST00000462810 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
SNRK-205ENST00000462810 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SNRK-205ENST00000462810 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
SNRK-205ENST00000462810 TIAM1Q13009 1591 aa20.77■□□□□ 0.91
SNRK-205ENST00000462810 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
SNRK-205ENST00000462810 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
SNRK-205ENST00000462810 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms