RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 NISCHQ9Y2I1 1504 aa46.06■■■■■ 4.96
XPA-202ENST00000462523 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
XPA-202ENST00000462523 ABCC9O60706 1549 aa39.4■■■■□ 3.9
XPA-202ENST00000462523 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
XPA-202ENST00000462523 DCAF8L2P0C7V8 631 aa38.19■■■■□ 3.7
XPA-202ENST00000462523 NACADO15069 1562 aa38.15■■■■□ 3.7
XPA-202ENST00000462523 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
XPA-202ENST00000462523 MYO15BQ96JP2 1530 aa38.08■■■■□ 3.69
XPA-202ENST00000462523 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
XPA-202ENST00000462523 UNC13AQ9UPW8 1703 aa37.35■■■■□ 3.57
XPA-202ENST00000462523 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
XPA-202ENST00000462523 BICRAQ9NZM4 1560 aa37.01■■■■□ 3.52
XPA-202ENST00000462523 PABPN1Q86U42 306 aaKnown RBP eCLIP36.89■■■■□ 3.5
XPA-202ENST00000462523 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
XPA-202ENST00000462523 EIF4G1Q04637 1599 aaKnown RBP35.94■■■■□ 3.34
XPA-202ENST00000462523 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
XPA-202ENST00000462523 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
XPA-202ENST00000462523 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
XPA-202ENST00000462523 SMARCA4P51532 1647 aa35.66■■■■□ 3.3
XPA-202ENST00000462523 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
XPA-202ENST00000462523 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
XPA-202ENST00000462523 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
XPA-202ENST00000462523 PEG3Q9GZU2 1588 aa35.3■■■■□ 3.24
XPA-202ENST00000462523 RSF1Q96T23 1441 aaPredicted RBP35.28■■■■□ 3.24
XPA-202ENST00000462523 SMARCA2P51531 1590 aa35.26■■■■□ 3.24
XPA-202ENST00000462523 NCAPD3P42695 1498 aa35.2■■■■□ 3.23
XPA-202ENST00000462523 WIZO95785 1651 aa35.2■■■■□ 3.23
XPA-202ENST00000462523 HMGXB3Q12766 1538 aa35.09■■■■□ 3.21
XPA-202ENST00000462523 BAZ1BQ9UIG0 1483 aaKnown RBP35.02■■■■□ 3.2
XPA-202ENST00000462523 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
XPA-202ENST00000462523 SUPT5HO00267 1087 aaKnown RBP34.68■■■■□ 3.14
XPA-202ENST00000462523 CCDC88BA6NC98 1476 aa34.4■■■■□ 3.1
XPA-202ENST00000462523 NESP48681 1621 aa34.29■■■■□ 3.08
XPA-202ENST00000462523 LAMC3Q9Y6N6 1575 aa34.2■■■■□ 3.07
XPA-202ENST00000462523 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
XPA-202ENST00000462523 CFTRP13569 1480 aa34.12■■■■□ 3.05
XPA-202ENST00000462523 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
XPA-202ENST00000462523 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
XPA-202ENST00000462523 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
XPA-202ENST00000462523 ERCC6Q03468 1493 aa33.85■■■■□ 3.01
XPA-202ENST00000462523 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
XPA-202ENST00000462523 CEP164Q9UPV0 1460 aa33.71■■■□□ 2.99
XPA-202ENST00000462523 THOC2Q8NI27 1593 aaKnown RBP33.66■■■□□ 2.98
XPA-202ENST00000462523 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.97
XPA-202ENST00000462523 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
XPA-202ENST00000462523 WDR62O43379 1518 aa33.48■■■□□ 2.95
XPA-202ENST00000462523 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
XPA-202ENST00000462523 CUX2O14529 1486 aa33.34■■■□□ 2.93
XPA-202ENST00000462523 DNMBPQ6XZF7 1577 aa33.34■■■□□ 2.93
XPA-202ENST00000462523 ABCC8Q09428 1581 aa33.33■■■□□ 2.93
XPA-202ENST00000462523 CUX1P39880 1505 aa33.31■■■□□ 2.92
XPA-202ENST00000462523 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
XPA-202ENST00000462523 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
XPA-202ENST00000462523 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
XPA-202ENST00000462523 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
XPA-202ENST00000462523 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
XPA-202ENST00000462523 FGD5Q6ZNL6 1462 aa33.09■■■□□ 2.89
XPA-202ENST00000462523 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
XPA-202ENST00000462523 IFT140Q96RY7 1462 aa32.97■■■□□ 2.87
XPA-202ENST00000462523 RAD54L2Q9Y4B4 1467 aa32.97■■■□□ 2.87
XPA-202ENST00000462523 SOGA1O94964 1423 aa32.93■■■□□ 2.86
XPA-202ENST00000462523 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
XPA-202ENST00000462523 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
XPA-202ENST00000462523 ABCA10Q8WWZ4 1543 aa32.78■■■□□ 2.84
XPA-202ENST00000462523 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
XPA-202ENST00000462523 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.83
XPA-202ENST00000462523 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
XPA-202ENST00000462523 TRIM41Q8WV44 630 aa32.7■■■□□ 2.82
XPA-202ENST00000462523 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
XPA-202ENST00000462523 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
XPA-202ENST00000462523 GAPVD1Q14C86 1478 aa32.57■■■□□ 2.81
XPA-202ENST00000462523 PBRM1Q86U86 1689 aa32.54■■■□□ 2.8
XPA-202ENST00000462523 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
XPA-202ENST00000462523 KIF27Q86VH2 1401 aa32.45■■■□□ 2.79
XPA-202ENST00000462523 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
XPA-202ENST00000462523 RUSC2Q8N2Y8 1516 aa32.42■■■□□ 2.78
XPA-202ENST00000462523 ERICH3Q5RHP9 1530 aa32.39■■■□□ 2.77
XPA-202ENST00000462523 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
XPA-202ENST00000462523 IGF1RP08069 1367 aa32.3■■■□□ 2.76
XPA-202ENST00000462523 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
XPA-202ENST00000462523 CHD1O14646 1710 aa32.26■■■□□ 2.76
XPA-202ENST00000462523 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
XPA-202ENST00000462523 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.74
XPA-202ENST00000462523 CUL7Q14999 1698 aa32.19■■■□□ 2.74
XPA-202ENST00000462523 FBLN2P98095 1184 aa32.14■■■□□ 2.74
XPA-202ENST00000462523 EEA1Q15075 1411 aa32.12■■■□□ 2.73
XPA-202ENST00000462523 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
XPA-202ENST00000462523 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
XPA-202ENST00000462523 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
XPA-202ENST00000462523 FAM9AQ8IZU1 332 aaPredicted RBP32.05■■■□□ 2.72
XPA-202ENST00000462523 CSRNP3Q8WYN3 585 aa32.02■■■□□ 2.72
XPA-202ENST00000462523 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
XPA-202ENST00000462523 PRXQ9BXM0 1461 aa32.01■■■□□ 2.71
XPA-202ENST00000462523 CEP170Q5SW79 1584 aa31.97■■■□□ 2.71
XPA-202ENST00000462523 RAPGEF2Q9Y4G8 1499 aa31.96■■■□□ 2.71
XPA-202ENST00000462523 NUP160Q12769 1436 aa31.94■■■□□ 2.7
XPA-202ENST00000462523 CLASP1Q7Z460 1538 aa31.91■■■□□ 2.7
XPA-202ENST00000462523 KIF21BO75037 1637 aa31.83■■■□□ 2.69
XPA-202ENST00000462523 DNAJC5Q9H3Z4 198 aa31.76■■■□□ 2.67
XPA-202ENST00000462523 KIAA0586Q9BVV6 1533 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms