RNA–Protein interactions for RNA: ENST00000462229.1

PHF19-208, Transcript of PHD finger protein 19, humanhuman

TSL 2

Gene PHF19, Length 550 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-208ENST00000462229 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
PHF19-208ENST00000462229 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
PHF19-208ENST00000462229 ABCC9O60706 1549 aa28.39■■■□□ 2.14
PHF19-208ENST00000462229 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
PHF19-208ENST00000462229 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
PHF19-208ENST00000462229 NACADO15069 1562 aa27.52■■■□□ 2
PHF19-208ENST00000462229 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
PHF19-208ENST00000462229 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
PHF19-208ENST00000462229 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
PHF19-208ENST00000462229 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
PHF19-208ENST00000462229 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
PHF19-208ENST00000462229 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PHF19-208ENST00000462229 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
PHF19-208ENST00000462229 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
PHF19-208ENST00000462229 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
PHF19-208ENST00000462229 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
PHF19-208ENST00000462229 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
PHF19-208ENST00000462229 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
PHF19-208ENST00000462229 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
PHF19-208ENST00000462229 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
PHF19-208ENST00000462229 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
PHF19-208ENST00000462229 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
PHF19-208ENST00000462229 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
PHF19-208ENST00000462229 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
PHF19-208ENST00000462229 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
PHF19-208ENST00000462229 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
PHF19-208ENST00000462229 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
PHF19-208ENST00000462229 WIZO95785 1651 aa25.26■■□□□ 1.63
PHF19-208ENST00000462229 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
PHF19-208ENST00000462229 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
PHF19-208ENST00000462229 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
PHF19-208ENST00000462229 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
PHF19-208ENST00000462229 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
PHF19-208ENST00000462229 LAMC3Q9Y6N6 1575 aa24.66■■□□□ 1.54
PHF19-208ENST00000462229 NESP48681 1621 aa24.65■■□□□ 1.54
PHF19-208ENST00000462229 CFTRP13569 1480 aa24.58■■□□□ 1.53
PHF19-208ENST00000462229 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
PHF19-208ENST00000462229 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
PHF19-208ENST00000462229 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
PHF19-208ENST00000462229 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
PHF19-208ENST00000462229 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
PHF19-208ENST00000462229 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
PHF19-208ENST00000462229 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
PHF19-208ENST00000462229 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
PHF19-208ENST00000462229 WDR62O43379 1518 aa24.11■■□□□ 1.45
PHF19-208ENST00000462229 CUX2O14529 1486 aa24.1■■□□□ 1.45
PHF19-208ENST00000462229 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
PHF19-208ENST00000462229 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
PHF19-208ENST00000462229 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
PHF19-208ENST00000462229 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
PHF19-208ENST00000462229 CUX1P39880 1505 aa23.93■■□□□ 1.42
PHF19-208ENST00000462229 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
PHF19-208ENST00000462229 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
PHF19-208ENST00000462229 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
PHF19-208ENST00000462229 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PHF19-208ENST00000462229 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
PHF19-208ENST00000462229 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
PHF19-208ENST00000462229 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
PHF19-208ENST00000462229 SOGA1O94964 1423 aa23.76■■□□□ 1.39
PHF19-208ENST00000462229 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
PHF19-208ENST00000462229 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
PHF19-208ENST00000462229 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
PHF19-208ENST00000462229 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
PHF19-208ENST00000462229 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
PHF19-208ENST00000462229 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
PHF19-208ENST00000462229 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.362e-7■■■■■ 31.3
PHF19-208ENST00000462229 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
PHF19-208ENST00000462229 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
PHF19-208ENST00000462229 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
PHF19-208ENST00000462229 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
PHF19-208ENST00000462229 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
PHF19-208ENST00000462229 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
PHF19-208ENST00000462229 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
PHF19-208ENST00000462229 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
PHF19-208ENST00000462229 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
PHF19-208ENST00000462229 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
PHF19-208ENST00000462229 SNAPC4Q5SXM2 1469 aa23.33■■□□□ 1.33
PHF19-208ENST00000462229 IGF1RP08069 1367 aa23.28■■□□□ 1.32
PHF19-208ENST00000462229 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
PHF19-208ENST00000462229 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
PHF19-208ENST00000462229 FBLN2P98095 1184 aa23.24■■□□□ 1.31
PHF19-208ENST00000462229 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
PHF19-208ENST00000462229 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
PHF19-208ENST00000462229 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
PHF19-208ENST00000462229 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
PHF19-208ENST00000462229 CHD1O14646 1710 aa23.19■■□□□ 1.3
PHF19-208ENST00000462229 EEA1Q15075 1411 aa23.16■■□□□ 1.3
PHF19-208ENST00000462229 CUL7Q14999 1698 aa23.16■■□□□ 1.3
PHF19-208ENST00000462229 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
PHF19-208ENST00000462229 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
PHF19-208ENST00000462229 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
PHF19-208ENST00000462229 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
PHF19-208ENST00000462229 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
PHF19-208ENST00000462229 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
PHF19-208ENST00000462229 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
PHF19-208ENST00000462229 NUP160Q12769 1436 aa23.01■■□□□ 1.27
PHF19-208ENST00000462229 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
PHF19-208ENST00000462229 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
PHF19-208ENST00000462229 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
PHF19-208ENST00000462229 KIF21BO75037 1637 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms