RNA–Protein interactions for RNA: ENST00000462166.1

TPRKB-204, Transcript of TP53RK binding protein, humanhuman

TSL 3

Gene TPRKB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-204ENST00000462166 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
TPRKB-204ENST00000462166 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
TPRKB-204ENST00000462166 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
TPRKB-204ENST00000462166 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
TPRKB-204ENST00000462166 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
TPRKB-204ENST00000462166 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
TPRKB-204ENST00000462166 ABCC9O60706 1549 aa22.06■■□□□ 1.12
TPRKB-204ENST00000462166 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
TPRKB-204ENST00000462166 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
TPRKB-204ENST00000462166 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
TPRKB-204ENST00000462166 NACADO15069 1562 aa21.14■□□□□ 0.97
TPRKB-204ENST00000462166 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
TPRKB-204ENST00000462166 FOXD1Q16676 465 aa21.04■□□□□ 0.96
TPRKB-204ENST00000462166 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
TPRKB-204ENST00000462166 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
TPRKB-204ENST00000462166 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
TPRKB-204ENST00000462166 SCRIBQ14160 1630 aa20.64■□□□□ 0.89
TPRKB-204ENST00000462166 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
TPRKB-204ENST00000462166 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
TPRKB-204ENST00000462166 ADRA2BP18089 450 aa20.55■□□□□ 0.88
TPRKB-204ENST00000462166 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
TPRKB-204ENST00000462166 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
TPRKB-204ENST00000462166 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
TPRKB-204ENST00000462166 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
TPRKB-204ENST00000462166 PIAS4Q8N2W9 510 aaPredicted RBP19.99■□□□□ 0.79
TPRKB-204ENST00000462166 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
TPRKB-204ENST00000462166 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
TPRKB-204ENST00000462166 MSH5O43196 834 aa19.72■□□□□ 0.75
TPRKB-204ENST00000462166 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
TPRKB-204ENST00000462166 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
TPRKB-204ENST00000462166 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
TPRKB-204ENST00000462166 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
TPRKB-204ENST00000462166 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
TPRKB-204ENST00000462166 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
TPRKB-204ENST00000462166 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
TPRKB-204ENST00000462166 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
TPRKB-204ENST00000462166 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
TPRKB-204ENST00000462166 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
TPRKB-204ENST00000462166 WIZO95785 1651 aa19.4■□□□□ 0.7
TPRKB-204ENST00000462166 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
TPRKB-204ENST00000462166 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
TPRKB-204ENST00000462166 KCNA4P22459 653 aa19.23■□□□□ 0.67
TPRKB-204ENST00000462166 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
TPRKB-204ENST00000462166 NESP48681 1621 aa19.11■□□□□ 0.65
TPRKB-204ENST00000462166 ERCC6Q03468 1493 aa19■□□□□ 0.63
TPRKB-204ENST00000462166 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
TPRKB-204ENST00000462166 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
TPRKB-204ENST00000462166 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
TPRKB-204ENST00000462166 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
TPRKB-204ENST00000462166 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
TPRKB-204ENST00000462166 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
TPRKB-204ENST00000462166 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
TPRKB-204ENST00000462166 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
TPRKB-204ENST00000462166 CFTRP13569 1480 aa18.84■□□□□ 0.61
TPRKB-204ENST00000462166 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
TPRKB-204ENST00000462166 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
TPRKB-204ENST00000462166 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
TPRKB-204ENST00000462166 CUX2O14529 1486 aa18.73■□□□□ 0.59
TPRKB-204ENST00000462166 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
TPRKB-204ENST00000462166 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
TPRKB-204ENST00000462166 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
TPRKB-204ENST00000462166 WDR62O43379 1518 aa18.63■□□□□ 0.57
TPRKB-204ENST00000462166 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
TPRKB-204ENST00000462166 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
TPRKB-204ENST00000462166 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
TPRKB-204ENST00000462166 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
TPRKB-204ENST00000462166 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
TPRKB-204ENST00000462166 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
TPRKB-204ENST00000462166 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
TPRKB-204ENST00000462166 CUX1P39880 1505 aa18.36■□□□□ 0.53
TPRKB-204ENST00000462166 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
TPRKB-204ENST00000462166 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
TPRKB-204ENST00000462166 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
TPRKB-204ENST00000462166 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
TPRKB-204ENST00000462166 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
TPRKB-204ENST00000462166 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
TPRKB-204ENST00000462166 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
TPRKB-204ENST00000462166 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
TPRKB-204ENST00000462166 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
TPRKB-204ENST00000462166 SOGA1O94964 1423 aa18.23■□□□□ 0.51
TPRKB-204ENST00000462166 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
TPRKB-204ENST00000462166 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
TPRKB-204ENST00000462166 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
TPRKB-204ENST00000462166 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
TPRKB-204ENST00000462166 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
TPRKB-204ENST00000462166 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.52e-9■■■■■ 39.4
TPRKB-204ENST00000462166 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
TPRKB-204ENST00000462166 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
TPRKB-204ENST00000462166 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
TPRKB-204ENST00000462166 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
TPRKB-204ENST00000462166 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
TPRKB-204ENST00000462166 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
TPRKB-204ENST00000462166 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.48
TPRKB-204ENST00000462166 CHD1O14646 1710 aa18.02■□□□□ 0.48
TPRKB-204ENST00000462166 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
TPRKB-204ENST00000462166 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
TPRKB-204ENST00000462166 GRIN2BQ13224 1484 aa18■□□□□ 0.47
TPRKB-204ENST00000462166 FBLN2P98095 1184 aa17.97■□□□□ 0.47
TPRKB-204ENST00000462166 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
TPRKB-204ENST00000462166 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms